Strain | Pseudomonas aeruginosa strain AZPAE15065 AZPAE15065_contig_4, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGTGCGCCGCGAGGAACCCGGCACGCGCCTCACCGTGTTGCAGTCGGCGGTGGCCGCGCGCGCGGAAACGCTCAGCGAAGAGCGTGTGATCAAGGAAGGC CAGCAGGTGCTGATCCTGCCGCAAGGCCTGCAGGCCAGCGAAGCGGCTCCGGCCTTGGCCGGCGCCTGGGCACAAGGCATGCTGGTGGTGGAGAACGCCC GGCTGGCCGACCTGGTGGCGGAACTGGGGCGCTATTCGCCGGCGCTGCTGCAGGTCGACCCGAGCATCGCCGACCTGCGCGTCACCGGCAGTTTCCCGCT GAAGGACACCCGCCTCGCCCTTCAGGCTTTGGAGCCGAGCCTGCCGGTGCGCAGCGTGAGACACAACGCCTGGTGGTTCGAAGTGGTGCCACGCTGAACC GAACGGGCCGGCGAAAAATTTTTCCCGCCGGCCCTATCACTTTTTCCGACTCGTCCGGCAAGGAGGCATTGAGACTCGTTTCCATCCAGGAGCCCCGCAC
|
|
DNA Sequence for Gene |
>NT81_RS04520
ATGCCCCGCCCGACGTTCCGTCCCGGCCTGCTCGCCCTAGCCATCGCCCTCGCCGTTCCCGCACCGTTCCTCCACGCAGCCCCGGCCGAACAGGCCAGCG TGCGCGACTACCGCATCGCCGCCGGGCCGCTGGCAGGCACCCTGAACCGCATCGCGGCCCAGGCCGGCCTGGTCCTCACCCTGGACCCGGCGCTCGCCGA AGGACGCAGCGCCCACGCCGTACAAGGTCGCTTCGACGCGCCCGGCGCATTGCGCGAAGCGCTCAAGGGCAGCGGCCTGGAGCTGGTGGAAAATGCCGGC GGCACCTACAGCCTGCGCAAGGTGCCGGAAGACACCTTGTCGTTGCAGGCGATGACGGTCAGCGGCGCCGAGGAAGACCCACTGGGGTCGACCAGCGGCT ACGTGGCCAAGCGCAGCATGACCGGGACCAAGACCGATACGCCGATCCTCGAGACCCCGCGCTCGATCTCGGTGGCGACCCGCCAGCAGATGACCGACCG CGCCGTGCACAACCTCGACGACGCGGTGCGCTACATGCCCGGCGTCGTCGCCAGCAGCTTCGGCAGCGACACCCGCTCCGACTGGTTGAAGGTGCGCGGC TTCAAGCCGACCCAGTTCCTCGACGGCCTGCCAATGGCGGTCGGCGTCTACAACAACCCGAAACTGGAAACCTGGAACCTGGAGCGTGTCGCCCTGTTGC GCGGCCCGGCCTCCTCGGTCTACGGCCAGACCCCGCCGGGCGGCATGCTCGACATGGTCAGCCTGCGTCCGCAGAACGTCGCCAGTCACGAGGTGAAGGC CGAGGTCGGCAACTACAACCACAAGCAGGTCAGCTTCGACAGCACCGGCCCGCTCGACGACGAGGGACGCTTTCTCTATCGCGTCTCCGGCGTGGTGCGC GACAGCAACACCCAGGTCGACCATATCGACGACAAGCGCTACAACATCGCCCCGAGCCTGACCTGGAACATCGACGACGACACCAGGCTGACCTTCCTCG GCCAGTTCAACCGCGACGATACCGGCATCACCAGCCAGTTCCTGCCGCTACGCGGAACCAAGTACGACGCGCCGTTCGGCAAGGTTTCCCATCACAAGAA CCTCGGCGATCCGGACTGGGAATACTACGACCGCACCTACTACTGGCTGGGCTACGCCTTCGAGCGGCGGATCAACGATGTCTGGCAGTTCCGCCAGAAC CTGCGCTACCTGCGCAACGACCTGTCGTTCCAGGCGCTGACCCCAGCCAGCTATTACGCTGCCGCCAGCGACGACGGTACCCTGCAGCGCACCAGCACAT CAGTGGACGAAGACGTCAGCCAGTTCGTGGTGGACAACAACTTCCAGGCCGACTTCGACACCGGCGCGCTGCGCCACACCCTGCTGCTGGGCCTGGACCA CAACCGGACCACCAACGAATACACCTCGATCTTCGGCTTCAATGTACCGCCGACCAACATCAACAACCCGATCTACGGCCAGCCGATTCCCAAGCCGCCG CGTTCCGACGCGTACTACGACTACAAGCAGAAGACCTACCAGACCGGCCTCTACGTCCAGGACCAGATCGCCCTCGACAACTGGCGCCTGACCCTCGGCG GTCGCGAGGACTGGGTGCACACAGGCGCCACCTTCTACAACAAGGGCGACGCCACCAATACCAGCCGCGACAAGAAGTTCAGCGGCAACGCGGCGCTCAG CTACATCTTCGACAATGGCGTGGCGCCCTACATCTCCTATGCGGAGTCGTTCCAGCCCACCACTGGCGCCGATATGAACAGCACCAGTTCGCTGAAGCCG ACCGAAGGCAAGCAATGGGAAATCGGCGTGAAGTACCAGCCGGTAGGCTCCGACTCGCTGTTCACCGCCGCGGTCTATGACCTGCGCCAGGAGAACGTCA GCGTGTCGCAGAACATAGGCGGCACGCCGGTCACTTCGCAGACGGGCGAAGTGAAGGTCTCCGGGATAGAACTGGAAGCCACCAGCAACGTCACCGACAA CCTGAAGATGATCGGCGCCTATAGCTACGCCGACACCGAAGTGAAAAAAGGCCAGTACGCAGGCAACCGCCTGCAACAGGCGCCGCGCAACCAGGCCTCG CTATGGGCCGACTACACCTGGCACGAGGGTACGCTGAACGGTTTCAGCGTGGGTGCCGGCGCCCGCTACGTAGGCTCGACCTACGGCGACCAGGCCAACA CCTACGACGGCTACGCCGGCTCGTACACCCTGTACGACGCCGCCGTGCGCTACGACCTGGGCCAATTGAACGGCAGCCTGAAAGGCGTCAGCGTGGCGGT CAATGCCAACAATCTGTTCAACAAGGACTACCTGGCGTCCTGCGACGGCTACTACTGCTACTACGGCGACCAGCGCAGCGTGGTGGGCAGCGTCAGCTAC AAGTGGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCGACGCGTCACAGGTGCGTAACGGCGGATAACCGCTTCGCGGTTATTCGCCCTACCGCAGAACGTACCTTCCGGGCACCGGATGCCCTCCTCCCGCCTG AGGGAGAGGGCCGGGATATCGGCAGCCGGCGCAATGGGGAGGACCTGCATTCCGGGCGCCGGAGATCATCGTTCACCCCGCGATCCGACCCCACAGCGCG CTGGCGTCGTCGTGGATCTTGAAACGCGGGAAAGCCAGGGCCTGGTCGTCGCCCTGTTCGATCTCGCGCAACTCGTCGAGCATGGCGCTCACTCCGACGT CCTCGAGGCGCCGCAGCAACTGTTCGTCGGTATAGCGGCGGAAAGGCTCGACCAGCCGGTCGAAGCCGTCGGTCATCAGCACGAAGGAACGCAACGCGGC GAGCGGCAAGGTCTCGCGCTGCACCTGGCCGAGCCAGCGGTCGCTGATGTCCAGCGCCCAGTAGCCCTCGGGCTTGTTCATCAGCAGGCGGTTCTGCCGC
|
|
Amino Acid Sequence |
>hydroxamate-type ferrisiderophore receptor
MPRPTFRPGLLALAIALAVPAPFLHAAPAEQASVRDYRIAAGPLAGTLNRIAAQAGLVLTLDPALAEGRSAHAVQGRFDAPGALREALKGSGLELVENAG GTYSLRKVPEDTLSLQAMTVSGAEEDPLGSTSGYVAKRSMTGTKTDTPILETPRSISVATRQQMTDRAVHNLDDAVRYMPGVVASSFGSDTRSDWLKVRG FKPTQFLDGLPMAVGVYNNPKLETWNLERVALLRGPASSVYGQTPPGGMLDMVSLRPQNVASHEVKAEVGNYNHKQVSFDSTGPLDDEGRFLYRVSGVVR DSNTQVDHIDDKRYNIAPSLTWNIDDDTRLTFLGQFNRDDTGITSQFLPLRGTKYDAPFGKVSHHKNLGDPDWEYYDRTYYWLGYAFERRINDVWQFRQN LRYLRNDLSFQALTPASYYAAASDDGTLQRTSTSVDEDVSQFVVDNNFQADFDTGALRHTLLLGLDHNRTTNEYTSIFGFNVPPTNINNPIYGQPIPKPP RSDAYYDYKQKTYQTGLYVQDQIALDNWRLTLGGREDWVHTGATFYNKGDATNTSRDKKFSGNAALSYIFDNGVAPYISYAESFQPTTGADMNSTSSLKP TEGKQWEIGVKYQPVGSDSLFTAAVYDLRQENVSVSQNIGGTPVTSQTGEVKVSGIELEATSNVTDNLKMIGAYSYADTEVKKGQYAGNRLQQAPRNQAS LWADYTWHEGTLNGFSVGAGARYVGSTYGDQANTYDGYAGSYTLYDAAVRYDLGQLNGSLKGVSVAVNANNLFNKDYLASCDGYYCYYGDQRSVVGSVSY KW
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|