Pseudomonas aeruginosa AZPAE15065, NT81_RS04400
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE15065 AZPAE15065_contig_4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGACGCGCTCGACTTCGCGAGCGATCAGGCCATAGCAGACGTAGTTGAGGCCGCTGCCGCCGTAGGCTTCGGGAATGGTCGCGCCGAGCAGGCCGGTCTC GCCCATCTCGCGGAAGATCTTCGGGTCGGTCTGTTCGTGGCGGAAGGCTTCGAGCACGCGCGGGGCCAGCTTGTCCTGGGCGAACTGCTGGGCGCTGTCG CGAACCATGCGCTCTTCTTCGGTGAGCTGCTGGTCCAGCAGCAGGGGATCTTCCCAGTTGAAGCTAGCTTTGGTGGCCATGCGTACATCCTCGTCAAGCG GTAGCGGAGGCTGGCGTGGGCCAGCCGGAATGGAAGCATCCTAAGAGCCTAGCGAATGGGGCGGCAAACGAGGAATTCGCACGCACTTGTGCTATTTTCT CACTCCGAGAAAATGAGTCTCGTATTTCATGCCCTTGAAGAGGCGCGAGGAATCGTGACCTGGGCGTCATAGATGCGAAACCGGCACTCCGGAGTCCTCC
|
|
| DNA Sequence for Gene |
>NT81_RS04400
ATGCGACGCAAGATCCCTTCCACCGCCGCGCTGGTCAGCTTCGAATCCGCCGCGCGCCACGAGAGCTTCACCAAGGCGGCGGAGGAGTTGTCCCTGACCC AGAGCGCGATCTGCCGGCAGATCGCCACGCTCGAGGAGTTCCTCGGTGTCGAGCTGTTCCGTCGCTCGCGGCGCGGGGTCAAGCTCACCGAGGCCGGGCT GTCCTATAGCCGGCGGGTGGCGGTACGCCTCGACGCGGTGGAGCGCGACACCCTGGCGGTGATGGGGCAACAGGGCGGCGGCGCGATCGAACTGGCGGTG GTGCCGACCTTCGGCACCCAATGGCTGTTGCCGCGGCTCAAGCGTTTCCAGCGGCTGCACCCGGAGGTCACGATCAACCTGACCAACCGCACCCGCCCGT TCCTCTTCGCCGACACCGAGTTCGACGCCGCGCTGTACTTCGGCGACGCCGACTGGTCGGGTACCGTCTCGCATTTCCTGATGCGCGAGAATCCGGTGCC GGTGTGCAGCCCGGAGCTGCTGGGCGGGCGTCGAACGCTGAGCGCCGAGCAGGTCGCCGGGCTGCCGCTGATGCAGCAGAGCACCCGGCCCTACGCTTGG CGCCAGTGGTTTCACTCCCAGGGACTGAACGTCGCCCACGACATGAGCGGGCCGCGCTACGAGCTGTTCTCCATGCTTGCCCAGGCGGCCATGCACGGCA TGGGCGTGGCCCTCATACCGCCCTTCCTGATCCAGGACGAGCTGGCCGACGGAAGGCTTATCGTGCCCATGCAACATGCCTATTTGAGCGAGAATGCGTA TTACCTGATCATTCCCGAGCGCAGGGTCGAATCGGCGATGCTCAATGCCTTCCGCGACTGGCTGGTGGAAGAGGCCAGGCAGTACCGCGAGGCCAACGGG CTGGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACGCGCAGGAACATCGGGTGGCGCAGGCAGGACGCGCCGCCCCGGGACCGGGCCGATCCGCCGGGTCCCGCGGAGCCGCGGCGGCGATACCGCCGGGCAT CCTCCACGACGGCCAGGATGGCGGCCGCGGAGCACCACACCAGGAGTTCACATGAATTTCCACACCCGCAAGTGGGTCAAGCCAGAAGATCTCAACCCCA ACGGCACCCTGTTCGGCGGCAGCCTGTTGCGCTGGATCGACGAAGAAGCGGCGATCTACGCGATCATCCAACTGGGCAACCAGCGCGTGGTCACCAAGTA CATTTCCGAGATCAACTTCGTCAGCTCGGCGCGCCAGGGCGACATCATCGAGCTGGGCATCACCGCCACCGACTTCGGTCGTACCTCGCTGACCATGACC TGCCACGTGCGCAACAAGATCACCCGCAAGAGCATCCTCACCATCGACAAGATGGTCTTCGTCAACCTCGGCCCGGACGGCCTGCCGGCGCCCCACGGCA
|
|
| Amino Acid Sequence |
>LysR family transcriptional regulator
MRRKIPSTAALVSFESAARHESFTKAAEELSLTQSAICRQIATLEEFLGVELFRRSRRGVKLTEAGLSYSRRVAVRLDAVERDTLAVMGQQGGGAIELAV VPTFGTQWLLPRLKRFQRLHPEVTINLTNRTRPFLFADTEFDAALYFGDADWSGTVSHFLMRENPVPVCSPELLGGRRTLSAEQVAGLPLMQQSTRPYAW RQWFHSQGLNVAHDMSGPRYELFSMLAQAAMHGMGVALIPPFLIQDELADGRLIVPMQHAYLSENAYYLIIPERRVESAMLNAFRDWLVEEARQYREANG LG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|