Strain | Pseudomonas aeruginosa strain AZPAE15065 AZPAE15065_contig_38, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTTGCATTGCGAGGTGCGTCGCAGGGGGATGAAGGTGGAAGGGGACTGTGCGGTTATTGCGGGATTCGACGTATCATCGGCCTTAGCCATGGGTCAGCTC CTATCGTTAAGCTGGTCTCTGGTTAGCGGGTCGTAGGTGTTCCTGCACCTGCGGCTCGCGTCTTTTCTGCCCCCAAGAAAACAGACTTGGCGACCCCTCC ATCTTCCTCCTACTGGTTTTTTATCCAATTCCTGGGCGTCTGAGAGAGGCTGCGGAAAAGTCTGGGGGAGATGTCCGGCGTTTCCAGGGCATGTCATCCG CCGCTGTCACGGGTAACCGGCGGATAACCGCCAGGCGGTTATTCGCCCTACGGGGTCGGGCCTCAAGCGGGCAGCGCGGGGTCGTTTGTCTGCGCGTAGC GCGGTGGGGGGCTGGGCAACCGGCACGACCCTGCTGACCCTTCCTGACCACCCCGTCAACCCGTAAACTACCCGGTTCCCCTGCCCAAACAAGGACTGCC
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DNA Sequence for Gene |
>NT81_RS26365
GTGAACAGCCCCGCCCTGCCCCTTTCCCGTGGCTTGCGCATCCGCGCCGAACTCAAGGAACTGCTGACCCTCGCCGCGCCGATCATGATCGCGCAACTGG CGACCACCGCCATGGGCTTCGTCGATGCGGTGATGGCCGGGCGCGCCAGTCCGCACGACCTGGCAGCGGTGGCGCTGGGCAACTCGATCTGGATCCCGAT GTTCCTGCTGATGACCGGCACCCTGCTCGCCACCACCGCCAAGGTCGCCCAGCGCTACGGCGCCGGCGACCAGCCCGGCACCGGGCCGCTGGTGCGCCAG GCGCTGTGGTTGGCGCTGCTGATCGGACCGCTGTCGGGGGCGGTGCTGTGGTGGTTGTCGGAGCCGATCCTCGGCTTGATGAAAGTGCGCCCGGAACTGA TCGGGCCGAGCCTGCTGTACCTCAAGGGCATCGCCCTGGGCTTCCCGGCGGCGGCGCTGTATCACGTACTGCGTTGCTACACCAACGGCCTGGGACGGAC CCGGCCGAGCATGGTGCTGGGGATCGGCGGGCTGCTGCTGAACATCCCGATCAACTACGCGCTGATCTACGGCCACTTCGGCATGCCGAAGATGGGCGGC CCCGGCTGCGGCTGGGCCACCGGCTCGGTGATGTGGTTCATGTTCCTCGGCATGCTGTTCTGGGTGAACAAGGCTTCCATCTACCGCGCCAGCCAGTTGT TTTCGCGCTGGGAGTGGCCGGATCGCGCGACCATCGGCCCGCTGGTGGCGGTCGGCCTGCCGATCGGCATCGCGGTGTTCGCCGAGTCGAGCATCTTCTC GGTGATCGCCCTGCTGATCGGCGGGCTCGACGAGAACGTGGTGGCCGGCCACCAGATCGCCCTGAACTTCAGCGCGCTGGTGTTCATGATTCCCTATTCG CTGGGGATGGCGGTGACCGTGCGGGTCGGCCACAACCTCGGCGCCGGCCTGCCGCGCGACGCGCGCTTCGCCGCCGGCGTGGGGATGGCCGCGGCGCTGG GCTACGCCTGCGTCTCGGCGAGCCTGATGTTGTTGCTGCGCGAGCAGATCGCCGCGATGTATTCGCCGGACCCGGCGGTGATCGCCATCGCCGCCTCGCT GATCGTGTTCTCCGCGTTGTTCCAGTTCTCCGACGCCTTGCAGGTCACCGCCGCCGGGGCCCTGCGTGGCTACCAGGACACCCGGGTGACGATGATCATG ACCCTGTTCGCCTACTGGGGCATCGGCCTGCCGGTGGGCTACAGCCTCGGCCTCACCGACTGGTTCCAGGAACCCACCGGACCGCGCGGCCTGTGGCAAG GCCTGGTGGTGGGCCTGACCGGCGCGGCGATCATGCTCTGCATCCGCCTGGCGCGCAGCGCGCGGCGCTTCATCCGCCAGCACGAGCGCCTGCAGCGGGA GGACGCGGAGGCCGCCTCAGTCCTTGGCCGGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCCGGGGCGGCGCCACGCGACTTGACGCTGAGGGTAGTGCCGACCGAGGCGAGGATGATCGCGCCGATGGCCAGCCATTGGGTCGGGCTCAGCCGCTCG CCGAGGAACAGCAGCCCGGAGAGCGCGCCGAAGGCCGGCTCGATGCTCATCAGGGTGCCGAAGGTGCGCGCCGGCAGGCGGGTCAGCGCGACCATTTCCA GGGTGTAGGGCAAGGCCGTGGAGAGCACCGCGACGCCCAGCGCCAACGGGATCAGCGCCGGGTCGAGGAGGTCGGCGCCGGCGTGGGCGACGCCGATCGG CACAACCAGGATCGCCGCCACCAGCACCCCCAGCGCGGCGCCCTGGGCGCCATGGTCGGCGCCGGCGCGCTGGCCGAAGAGGATGTACAGCGCCCAGCAC ACGCCGGCACCGAGGGCATAGGCGGCGCCGACCAGGTCGAGCGGCTCGGCGCTGTTGCCCAGCGGCAGCAACAGCCAGATGCCGAACACCGCCAGGCCGA
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Amino Acid Sequence |
>multidrug resistance protein pmpM
MNSPALPLSRGLRIRAELKELLTLAAPIMIAQLATTAMGFVDAVMAGRASPHDLAAVALGNSIWIPMFLLMTGTLLATTAKVAQRYGAGDQPGTGPLVRQ ALWLALLIGPLSGAVLWWLSEPILGLMKVRPELIGPSLLYLKGIALGFPAAALYHVLRCYTNGLGRTRPSMVLGIGGLLLNIPINYALIYGHFGMPKMGG PGCGWATGSVMWFMFLGMLFWVNKASIYRASQLFSRWEWPDRATIGPLVAVGLPIGIAVFAESSIFSVIALLIGGLDENVVAGHQIALNFSALVFMIPYS LGMAVTVRVGHNLGAGLPRDARFAAGVGMAAALGYACVSASLMLLLREQIAAMYSPDPAVIAIAASLIVFSALFQFSDALQVTAAGALRGYQDTRVTMIM TLFAYWGIGLPVGYSLGLTDWFQEPTGPRGLWQGLVVGLTGAAIMLCIRLARSARRFIRQHERLQREDAEAASVLGR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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