Strain | Pseudomonas aeruginosa strain AZPAE15065 AZPAE15065_contig_27, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACGCTCTGGGTACTGATGATCTATTTCGGCACGGTGAGCGGCCTGAACGCCCTCGGCGACCTTTTCGGCAAGCCGGACCTGGCGCTCTCGCCGTTCGCCG CCGGCACCCTGGCCCTCGGCCTGTGCTTCGGCGCCTACGCCACCGAGGTGTTCCGCGGCGCGCTGTTGTCCATTCCGCGCGGCCATCGCGAGGCCGGCCA GGCGCTCGGCCTGTCGCCCGGTCGGATATTCTGGCGCATCGTCCTGCCGCAGATCTGGCGGGTCGCCCTGCCCGGCCTCGGCAACCTGTACCTGATCCTG CTGAAGGACACCGCGCTGGTGTCGCTGATCACCCTCGACGAGATCATGCGCAAGGCGCAGGTCGCCTCCAACGCGACCAAGGAACCCTTCACCTTCTACA TGACCGCGGCCGCCATCTACCTGAGCCTCACGGTCGTCATCATGGTCGCCCTGCACTTCCTCGAACGTCGCGCCGGCCGTGGTTTCGTGAGGAACGAGCT
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DNA Sequence for Gene |
>NT81_RS21070
ATGAGCGAGTGGGAGCTGATCCTCAAGTGGATGCCGAAGATGCTCCAGGGCGCGGCGCTGACCCTGGAGCTGCTGGCGATCGCGGTGGTCGCCGGGCTCG CCCTGGCCCTGCCGCTGGGCATCGCCCGCGCCTCGCGGCACTGGTACGTGCGCGCGGTGCCGTACGCCTACATCTTCTTCTTCCGCGGCACGCCGCTGCT GCTGCAACTGTTCATCGTCTACTACGGCCTGGCGCAGTTCGAGGAAGTGCGCAAGAGCGCCTTCTGGCCCTACCTGCGCGATCCGTACTGGTGCGCGCTG CTGACCATGACCCTGCACACCGCCGCCTATATCGCCGAGATCCTCCGCGGCGCGATCCACTCGGTGCCGGTCGGCGAGGTGGAGGCCGCCCGCGCCCTCG GCATGTCGCGGCGCCAGGCGCTCTGGCACATCATCCTGCCGCGCGCGGTGCGCATCGGCCTGCCGGCCTACAGCAACGAAGTGATCCTGATGCTCAAGGC CAGCGCGGTGGTCTACACCGTGACCCTGTTCGACATCATGGGCATGGCCCGGACCATCATCGCCCGCACCTACGAATCGATGCTGTTCTTCTGCCTGGCC GGCGCGCTGTACCTGGTGATCACCATCGTGCTGACGCGGATCTTCCGCCTGATCGAACGCTGGTTGCGGGTCGACGCCACCCAGGGCCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGGGCGCTTTCCGATGCCTGCGGGGCGGCTATAATCGCCGCCCCGTTTTCCCGCTGCCGCTTGCATCGTGTCCGAAACCTTCCCGTTCCTCACTGGCGA CGCCCTGTCGCAGCGCTTCCTCGCGCTGGACGCGTTCCTCCTCGAACATCAGCGGCTCTGGCGACCCCGCCCGTTCAGCGAACCGACCCTGGCGTGGGAA GCCGAACACACCGAGCTGGCGTCCTGGCTGCGCGGGCGCAGCCTCGAACAGGCCGACGCGGAGCACAACCAGCCCACCCGCCTGGCCGCGCCCGCGCCTT ATCCGCAGCTCGCCGCCCAAGCCGCGGCGCTGGGCGCGGTCGGCGAACTGCCATTGGCGGAACGCCCGCAGGCACCGAACCGCTTCAACGTCGACGTACC GGGACGCAAGTGGCAGCAGATCGGCCTGTTCGCCGGGCGCCTGCAGTTCGCCCGGCCGGTCGTCCACTGGCTCGACTGGTGCTCCGGCAAGGGCCATCTG
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Amino Acid Sequence |
>amino acid ABC transporter permease
MSEWELILKWMPKMLQGAALTLELLAIAVVAGLALALPLGIARASRHWYVRAVPYAYIFFFRGTPLLLQLFIVYYGLAQFEEVRKSAFWPYLRDPYWCAL LTMTLHTAAYIAEILRGAIHSVPVGEVEAARALGMSRRQALWHIILPRAVRIGLPAYSNEVILMLKASAVVYTVTLFDIMGMARTIIARTYESMLFFCLA GALYLVITIVLTRIFRLIERWLRVDATQGR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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