Pseudomonas aeruginosa AZPAE15065, NT81_RS18465

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE15065 AZPAE15065_contig_26, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCAGGCTTCGTTGCAGAACGCGACCCAATATCTGCAACGCCTGGAAATCGCCCACAAGGTCAGCGTCATGGACGGCAACTTCAGCACCACCGATCTCTC CACCGGGCAGCGCAAGCGCCTTGCGCTGATCAATGCCTGGCTCGAAGAGCGACCGGTCCTGGTCTTCGACGAATGGGCCGCAGACCAGGACCCGGCTTTC CGCAGGGTCTTCTACACCGAACTGTTGCCGGACCTGAAACGCCAGGGCAAGACCATCATCGTGATCAGCCACGATGATCGCTATTTCGAAATGGCGGACC AGTTGATAAGGCTCTCGGCAGGCAAGGTCGTCAAGGAAACCGAGACGGCGTGAAACTTTTTCATCCGGTTTTCCGTGGGTAAAACGTCATACTAAGAGAA TTGAGAAGCGATCTCATTTATTCGCAACTTGCCAACCTAAGAAGAGCAATCACCCATGCCAGCACCACACGGTCTCAGTCCTCTGAGTAAGGCGTTTTTG
DNA Sequence for Gene
>NT81_RS18465
ATGCGCCGTGCCTTCCAACGCAGGATTCTTCCCCACTCGCTCGCCATGGCCCTGAGCCTGCCGCTGGCGGGATATGTCCAGGCGCAGGAAGTCGAGTTCG ACATCCCTCCCCAGGCGCTGGGCAGCGCACTCCAGGAGTTCGGCCGCCAGGCGGATATCCAGGTGCTGTATCGCCCGGAAGAGGTCCGGAACAAGCGTAG CAGTGCGATCAAGGGCAAGCTGGAGCCGAACCAGGCGATTACCGAGCTGCTTCGTGGCACCGGCGCATCGGTGGACTTCCAGGGCAATGCGATAACCATC AGCGTCGCCGAGGCGGCGGACAGCAGCGTCGATCTCGGCGCCACCATGATCACCTCCAACCAGTTGGGCACCATCACCGAGGACAGCGGCTCCTATACGC CAGGCACTATCGCCACGGCGACCCGCCTGGTCCTGACTCCGCGCGAGACGCCCCAGTCGATCACCGTGGTCACCCGCCAGAACATGGACGACTTCGGCCT CAACAACATCGACGACGTCATGCGCCATACGCCGGGCATCACCGTCTCGGCCTACGACACTGACCGCAACAACTACTATGCCCGCGGCTTCTCGATCAAC AACTTCCAGTACGACGGGATTCCCTCGACGGCCCGCAACGTCGGCTACTCCGCGGGCAATACGCTCAGTGACATGGCCATCTACGACCGGGTGGAAGTAC TCAAGGGGGCGACCGGCCTGCTCACCGGTGCGGGGTCCCTCGGCGCCACGATCAACCTGATCCGCAAGAAACCTACCCATGAATTCAAGGGCCATGTCGA ACTGGGCGCGGGCAGTTGGGACAATTACCGCTCCGAACTGGACGTCAGCGGCCCGCTGACCGAGTCCGGCAACGTCCGCGGCCGGGCGGTAGCCGCCTAC CAGGATAAGCACTCGTTCATGGATCACTACGAGCGCAAAACCAGCGTCTATTACGGCATCCTCGAGTTCGATCTGAATCCCGACACCATGCTTACCGTCG GCGCCGACTATCAGGACAACGATCCCAAGGGATCGGGCTGGTCGGGCAGCTTCCCGCTCTTCGACAGCCAGGGCAACCGCAACGACGTCTCCCGCTCCTT CAACAACGGAGCCAAGTGGAGCAGTTGGGAGCAGTACACCCGCACCGTCTTCGCCAACCTCGAGCACAATTTCGCCAACGGCTGGGTCGGCAAGGTGCAA CTCGATCACAAGATCAACGGCTACCACGCGCCCCTCGGCGCGATCATGGGCGACTGGCCGGCACCGGACAACAGCGCCAAGATCGTTGCGCAGAAGTACA CCGGCGAAACCAAGAGCAACTCGCTGGATATCTATCTCACCGGCCCCTTCCAGTTCCTCGGTCGCGAGCACGAGCTGGTGGTCGGCACCTCGGCTTCCTT CTCCCACTGGGAGGGCAAGAGCTACTGGAACCTGCGCAACTACGACAACACCACCGACGACTTCATCAACTGGGACGGCGATATAGGCAAGCCCGACTGG GGTACCCCCTCCCAGTACATCGATGACAAGACCCGCCAGTTGGGCAGCTACATGACCGCCCGCTTCAATGTGACCGATGACCTGAACCTGTTCCTAGGTG GACGCGTGGTCGACTACCGGGTAACCGGCCTGAATCCGACCATTCGCGAGTCCGGACGCTTCATTCCCTACGTCGGCGCGGTCTACGACCTGAACGATAC CTACTCCGTCTACGCCAGCTATACCGACATCTTCATGCCGCAGGACAGTTGGTATCGCGACAGCAGCAACAAGCTGCTCGAACCCGACGAAGGCCAGAAC TACGAGATCGGCATCAAGGGTGAATATCTCGACGGACGACTCAATACCAGTCTCGCCTACTTCGAGATTCATGAGGAAAACCGCGCGGAGGAAGACGCCC TCTACAACAGCAAACCGACCAACCCCGCCATCACCTACGCCTACAAGGGCATCAAGGCCAAGACCAAGGGCTACGAGGCGGAAATCTCGGGTGAACTGGC GCCAGGCTGGCAGGTTCAGGCTGGCTATACCCACAAGATCATTCGCGACGACAGTGGCAAGAAGGTTTCCACCTGGGAGCCTCAGGACCAGTTGAGCCTC TACACCAGCTACAAGTTCAAGGGCGCCCTGGACAAGCTCACGGTCGGCGGCGGCGCCCGCTGGCAGGGCAAGAGCTGGCAGATGGTCTACAACAATCCCC GCAGCCGCTGGGAAAAGTTCTCCCAGGAAGACTACTGGCTGGTGGACCTGATGGCCCGCTACCAGATCACCGACAAGCTGTCGGCCAGCGTCAACGTCAA CAACGTCTTCGACAAGACCTACTACACCAACATCGGTTTCTACACCTCGGCATCCTATGGCGATCCACGGAACCTGATGTTCAGCACTCGCTGGGACTTC TGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCCGGCTGCGAAAAAGAACGCCCCGCAATGCGGGGCGTTCTGCTTCTCGGCTACCCCACGCGACCCATCGCCGAAGACGCCTGTCGGCACGACACCAAA TGATTCCTGTACAGAAACAAAGAGCCCGCCTGAAGGCGGGCTTTGAACGGAACGGACCTGAGATCAGCGCCCGGCACGCTCCAGGGCGGCCCGGAAGCTC TGCACAAACTCAGGGTGGTCGATGATCTTGTCGTGCCGGGTATCCAGCACCCGCACCGGTTCGACACGCTCCGCCCCGATCGCCTCGGCCATCGAGCGCT CCACCGCGCTCCGCTGGATGGCATTGGTGCTGCGCGCGGCCCACCAGAGGCTGACCTTCGCCGTCAGACGCGGGTAATCCATCGCTTTCAGGCGCTCGTC GAGGATCTGTTTCAACTCCCAGGACACTTCCAGTTCGTTGCTCTGTGCGATTTCGCTGCGCAGTGTCGCGAACTCGGCGCCGATCTCCGCTTCCGCCCAG
Amino Acid Sequence
>ligand-gated channel
MRRAFQRRILPHSLAMALSLPLAGYVQAQEVEFDIPPQALGSALQEFGRQADIQVLYRPEEVRNKRSSAIKGKLEPNQAITELLRGTGASVDFQGNAITI SVAEAADSSVDLGATMITSNQLGTITEDSGSYTPGTIATATRLVLTPRETPQSITVVTRQNMDDFGLNNIDDVMRHTPGITVSAYDTDRNNYYARGFSIN NFQYDGIPSTARNVGYSAGNTLSDMAIYDRVEVLKGATGLLTGAGSLGATINLIRKKPTHEFKGHVELGAGSWDNYRSELDVSGPLTESGNVRGRAVAAY QDKHSFMDHYERKTSVYYGILEFDLNPDTMLTVGADYQDNDPKGSGWSGSFPLFDSQGNRNDVSRSFNNGAKWSSWEQYTRTVFANLEHNFANGWVGKVQ LDHKINGYHAPLGAIMGDWPAPDNSAKIVAQKYTGETKSNSLDIYLTGPFQFLGREHELVVGTSASFSHWEGKSYWNLRNYDNTTDDFINWDGDIGKPDW GTPSQYIDDKTRQLGSYMTARFNVTDDLNLFLGGRVVDYRVTGLNPTIRESGRFIPYVGAVYDLNDTYSVYASYTDIFMPQDSWYRDSSNKLLEPDEGQN YEIGIKGEYLDGRLNTSLAYFEIHEENRAEEDALYNSKPTNPAITYAYKGIKAKTKGYEAEISGELAPGWQVQAGYTHKIIRDDSGKKVSTWEPQDQLSL YTSYKFKGALDKLTVGGGARWQGKSWQMVYNNPRSRWEKFSQEDYWLVDLMARYQITDKLSASVNVNNVFDKTYYTNIGFYTSASYGDPRNLMFSTRWDF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site