Strain | Pseudomonas aeruginosa strain AZPAE15065 AZPAE15065_contig_24, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TTCGCTCGCGGACATCGTCGCAATCACCGAGGGCAAGGCGGGAACACGGGTCAGCACGCGCAAGGCGGGCATCGAGTACCGCTGATACACCACCCCCAGG GCCGCTTCGCGGCCCTTCTTCATTCTCCTCTGCCGGCATCGGGCGAAAGGTGGATAGCGCCACGCCTCTGCGCGCGGACTTTCAAGCAAGTCCCGCAACA CTCGCCCACGCCCCACCTCTGCCAACAGCCCGGCCATGGGCGTCAATCCCCCCACGGCAGACCGCCAGCACTTGTGGAAAGCCCACGCAACGCGGTATTC AGTAGGAAAATACGTGACTCGATAGTCATGATTCACGTCAGCATAGTCACCCTGATCATTTCAACGGCCACTGGCTCGTGCCCGGGTCCGTGAAGCTCGC CTCGCCGACGGGAAAGGCCGCCATCGCCGCCACGCGCTTCCCGCTCCGGACCAGGCAGCAGCCCGGCACGCGAACGACTATTCGAAGGAGTTTCTGAGTG
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DNA Sequence for Gene |
>NT81_RS18055
ATGTCTCGACTACCGGTCATTGTTGGTTTCGGTGGCTACAACGCAGCAGGCCGTAGTTCCTTCCACCACGGCTTCCGCCGCATGGTCATCGAATCGATGG ACCCGCAGGCGCGCCAGGAAACCCTAGCCGGCCTGGCGGTCATGATGAAACTGGTCAAGGCCGAAGGCGGCCGCTACCTGGCCGAAGACGGCACGCCGCT GTCCCCGGAGGACATCGAGCGGCGCTACGCCGAACGCATCTTCGCCTCTACCCTGGTGCGACGCATCGAACCGCAGTACCTCGACCCGGATGCAGTCCAC TGGCACAAGGTCCTCGAGCTGTCCCCTGCCGAAGGCCAGGCGCTGACCTTCAAGGCCTCGCCCAAGCAACTGCCCGAGCCGCTGCCGGCCAACTGGTCGA TCGCTCCCGCGGAGGACGGCGAGGTGCTGGTGAGCATCCACGAGCGCTGCGAGTTCAAGGTCGACAGCTACCGTGCGCTGACGGTGAAGTCCGCCGGCCA GTTGCCCACCGGTTTCGAACCGGGCGAGCTGTACAACTCGCGCTTCCACCCGCGCGGCCTGCAGATGTCGGTGGTCGCCGCGACCGACGCGATCCGCTCC ACCGGCATCGACTGGAAGACCATCGTCGACAACGTCCAGCCCGACGAGATCGCGGTGTTCTCCGGCAGCATCATGAGCCAGCTCGACGACAACGGTTTCG GCGGCCTGATGCAATCCCGCCTGAAGGGCCACCGGGTCTCGGCCAAGCAACTGCCGCTGGGCTTCAACAGCATGCCCACCGATTTCATCAATGCCTACGT GCTCGGCAGCGTCGGCATGACCGGCAGCATCACAGGCGCCTGCGCCACCTTCCTCTACAACCTGCAGAAGGCTATCGACGTCATCACCAGCGGCCAGGCC CGGGTGGTCATCGTCGGCAACAGCGAGGCGCCGATCCTGCCGGAGTGCATTGAGGGCTACAGCGCCATGGGCGCACTGGCCACCGAAGAAGGCCTGCGCC TGATCGAAGGCCGCGACGACGTGGACTTCCGCCGCGCCAGCCGGCCGTTCGGCGAGAACTGCGGCTTCACCCTGGCCGAGTCCAGCCAATACGTAGTGCT GATGGACGACGAACTGGCCCTGCGCCTGGGCGCGGATATCCACGGCGCGGTAACCGACGTGTTCATCAACGCCGACGGTTTCAAGAAGTCCATCTCCGCC CCCGGCCCGGGCAACTACCTGACGGTAGCCAAGGCGGTGGCCAGCGCGGTGCAGATCGTCGGCCTGGACACCGTGCGCCACGCCAGCTTCGTCCACGCCC ACGGCTCCAGCACGCCGGCCAACCGGGTCACCGAATCGGAAATCCTCGACCGCGTGGCCAGCGCCTTCGGCATCGACGGCTGGCCGGTCACCGCGGTGAA GGCCTACGTCGGCCACTCCCTGGCCACCGCCAGCGCCGACCAGCTGATCTCCGCCCTGGGCACGTTCAAGTACGGCATCCTCCCTGGGATCAAGACCATC GACAAGGTCGCCGACGACGTCCACCAGCAGCGCCTGAGCATCTCCAATCGCGACATGCGCCAGGACAAGCCGCTGGAGGTATGCTTCATCAATTCCAAGG GCTTCGGCGGCAACAACGCCAGCGGCGTGGTGCTGTCGCCGCGAATCGCCGAGAAGATGCTGCGCAAGCGCCATGGCCAAGCGGCCTTCGCCGCCTACGT CGAGAAGCGCGAGCAGACCCGCGCCGCCGCCCGCGCCTACGACCAGCGCGCGCTGCAGGGCGACCTGGAGATCATCTACAACTTCGGCCAGGACCTGATC GACGAACACGCCATCGAGGTCAGCGCCGAACAGGTGACGGTGCCCGGCTTCAGCCAGCCGCTGGTATACAAGAAGGACGCGCGTTTCAGCGACATGCTCG ACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGCCGCCACAACGGAAAAGGCCCGGCTAGACCGGGCCTTTTCGTTTCAGTGCAGCGCGCGCGCCAGTTGGATCAGCTCGCTGCGCCACTCGGCGGCGCG CGGCAGGGCCAGGAAGGAGCCGTTGAGGTAATCCTCGCGCGGCTCGTAGGTGAATGGCGCACCATGCAGGTCGAGCACCTCGCCGCCGGCGCCTTCCAGC ACACCCTGGGCGGCGGCCGTGTCCCATTGCGAGGTTGGCGTCAGGCGCGGATAGCAGTCGGCAGCGCCCTCGGCCAGCAGGCAGAACTTCAGCGAACTGC CGATGCTGGCTCGCCGCAGGTCGCCGAAGCGCTCGCTCAAGCCATCCAGCAGGCGCTCCTGGGCCGGGCTGCCATGGCGCTTGCTGGCCACCACGGTGAA GGCCTCCTCGGGCTCCAGGCGCACACTGATCGGTTGCGCGCGGCCATCGGCCTCCTCGCGCCAGGCACCGAGACCGGCGCCACCGTAGTAGCAGCGGCCG
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Amino Acid Sequence |
>beta-ketoacyl synthase
MSRLPVIVGFGGYNAAGRSSFHHGFRRMVIESMDPQARQETLAGLAVMMKLVKAEGGRYLAEDGTPLSPEDIERRYAERIFASTLVRRIEPQYLDPDAVH WHKVLELSPAEGQALTFKASPKQLPEPLPANWSIAPAEDGEVLVSIHERCEFKVDSYRALTVKSAGQLPTGFEPGELYNSRFHPRGLQMSVVAATDAIRS TGIDWKTIVDNVQPDEIAVFSGSIMSQLDDNGFGGLMQSRLKGHRVSAKQLPLGFNSMPTDFINAYVLGSVGMTGSITGACATFLYNLQKAIDVITSGQA RVVIVGNSEAPILPECIEGYSAMGALATEEGLRLIEGRDDVDFRRASRPFGENCGFTLAESSQYVVLMDDELALRLGADIHGAVTDVFINADGFKKSISA PGPGNYLTVAKAVASAVQIVGLDTVRHASFVHAHGSSTPANRVTESEILDRVASAFGIDGWPVTAVKAYVGHSLATASADQLISALGTFKYGILPGIKTI DKVADDVHQQRLSISNRDMRQDKPLEVCFINSKGFGGNNASGVVLSPRIAEKMLRKRHGQAAFAAYVEKREQTRAAARAYDQRALQGDLEIIYNFGQDLI DEHAIEVSAEQVTVPGFSQPLVYKKDARFSDMLD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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