Strain | Pseudomonas aeruginosa strain AZPAE14980 AZPAE14980_contig_9, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGCCGAAGCTGCTGGAGCTGCACGCGGACATGCGGGTGGTGATCCTCACCGGCTATTCCAGCATCGCCACCGCGGTGGAGGCGATCAAGCGCGGCGCCTG CAACTACCTGTGCAAGCCGGCGGATGCCGATGACGTGTTGGCCGCGCTGCTCTCCGAGCACGCCGACCTGGACACCCTGGTGCCGGAAAACCCGATGTCG GTGGATCGCCTGCAATGGGAGCACATCCAGCGCGTGCTCGCCGAGCACGAGGGCAACATCTCCGCCACCGCCCGCGCCCTGGGCATGCATCGACGGACCT TGCAGCGCAAGCTGCAGAAGCGGCCGGTACGGCGCTGAAGCGTAAATGACAACGGGGGCGCCGCATGGCGCCCCCTATACTTTCCGCTTTCCGTCGAATC GCGGTGGATTTCGCACATTCCGCCGGTCGCCGGGGATATCCAGCGGACAGCGCAATCGTTAAGATGCAACTTTCATGAATCGCACGACCAGGGATTGATC
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DNA Sequence for Gene |
>NS95_RS10180
ATGCGTATCTTCGGTTCGAGTGCCGGCTGCCTGTCGGTGCTGTTCGGACTGGCCTTCGGGCTGCCTGCACTAGCCGAGCCTTCGGTGGACCTGGATGGTC CGACGGCAGGCTGGCGCTATTCCGGCCTGCTCGAGCAGCCCGATGCCCCGCGTGTCGCCTATCCGACTCCGCCCATCGATCGCGGCGGCCAGCGCGGCCG CAGCCTGATCGAAGGACACCTGCGCGAACTGGTCGGCACCGAGCGCGCCCAGCGCCTGGTGGTCAACGGCAATCCTCTCCCTCTCTATACCGACGGCGCC GGGCGCTTCGTCCGCCCCTATGCGTTCGGCCACGGCTCCAACGGCGTCCAGGTCGGCAGCGCCGACGGCAAGATCCTCAAGCGCGTACAGTTCTACGAGG CCAATCGCTCCCAACTGCCGCCGCGCGTGCGCGTGGTGCTGGGTTGGGACGATCCGAAGGCCGAGCTCGACCTGCATATCGTCACCCCCGATGGCCAGCA CGCCTACTGGGCGCATCCGCGCCTGAGCAACAGCGGCGGCCTCGATCCGGACGGCGTCGACGGGCCCGGCCCGGAGATGTTCACCATGGGCGCGCCGCTG CACGGCACCTACCTGATCTACGTGAACTACTGGGGCAACCTCAACAACCAGGGCTACAACTTCCAGGCCGGCAGCAACGTACAGGACGTGATCACCGCGC AGGTCAACCTGGTGTTCAACGAAAACAGCGTCGACGAGAAGCACGAGACCTTCGTCGTGCCCCTGCGCACCATCGGCGACCTGGTGCTGGTCAAGACCTT TACCTACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGCATCCCCTCGTACGGATGACACGGGATTAGCGAACCATGAGCGAGAACAACACCCCCAGCCCTGCCAACGGAACCCCTGCGCCCGCCGCTGCGCGCAC CCGAAGCGCCCTGTGGCCGGTGCTGGGGATCGTCGCCGCGCTGGCCGCCGGCGGTGTGCTGGCCTGGCAGATGGGCTGGCTGGAGCGGCTCGGCGGAGGG CGCCCGGCCGAAGAGGACCTCGGCCAGCCGATCGGCGCCCAGGCACCCGCGGCCGCCGACGCGCCACGTGCCTACCGTGACCTGCGCAAGCCCGACGCGC TGATCGAGAGCGTGTCGCTGAGCCGCCTGCCGAAGGAAATCCTCGAGGTGCCGTTGCTGCGCGATACCCTGACCGAGGACTTCGTCTTCTATTACGAGAA CAATGGCGACCGCCTCGGCCTGACCGGTACGTTGCGGCGGATCATCTACGAGCACGACCTGACCCTGAAGGACAGCCTGGTCGAGGAACTGCTCGACCAA
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Amino Acid Sequence |
>hypothetical protein
MRIFGSSAGCLSVLFGLAFGLPALAEPSVDLDGPTAGWRYSGLLEQPDAPRVAYPTPPIDRGGQRGRSLIEGHLRELVGTERAQRLVVNGNPLPLYTDGA GRFVRPYAFGHGSNGVQVGSADGKILKRVQFYEANRSQLPPRVRVVLGWDDPKAELDLHIVTPDGQHAYWAHPRLSNSGGLDPDGVDGPGPEMFTMGAPL HGTYLIYVNYWGNLNNQGYNFQAGSNVQDVITAQVNLVFNENSVDEKHETFVVPLRTIGDLVLVKTFTY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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