Strain | Pseudomonas aeruginosa strain AZPAE14980 AZPAE14980_contig_7, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAGTATTTCTACTTCCACAACTTCATCTACGAGTCGGTGTGGAAGAACAACCTGCGCCGCAGCAGCGAACGCACCGCCACCTTCGACCTGCTGCACAAGT ACGGTCCGGACTACAAGGTGGTGTTCGTCGGCGACGCGGCGATGGCGCCCTACGAAATCACCCAGGCCGGCGGCAGCGTCGAGCACTGGAACGAGGAAGC CGGTTACGTCTGGATGCAGCGCTTCATGGAGAAGTACAAGAAGCTCATCTGGATCAACCCCTATCCGAAGGACACCTGGAACTACACGGCGTCCACCGGC CTGGTCCGCGAACTGGTCAAGGAACAGATGTATCCGTTGACCCTGAGCGGCCTGGAGGAGGGCATGCGCTTCCTCTCGCGCGGTTGAGCCAACTGCCTGC GGGACCGGCGACAGGCGCGGCGGCACGCAACTTGCCTACCCTGTGTATCCCGTCCGCGCGGTAACAGCGCGGCGCGGCCACCGGTAACGATGGGCACGCC
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DNA Sequence for Gene |
>NS95_RS08730
ATGATCGACTCGACCTTCTCCCGCGCCACCTGGCTCAACTCGCTGCACATGTCGACCCTCACTCTCTCGCTGCTGGAGAAGGAAGGGTTCGCCCGCGAGC AACTGCTCGAAGGCAGTGGCATCACCCCCGCCGACCTGCTCGACCTGCGGCGCCTGATCAGCCCCTGGCAGGAGCAGCAGGTGTTCGCCAACGCCTGCCG GCTCAGCGACGAGCCGGCCCTCGGCCTGCGCCTGGGGCTGCGCACGTGGATTTCCGCCTACGGCCTGCTCGGCTACGCGCTGCTCTCCGCGCCGACCCTC GGCGAGGCGCTGCGCATCGGCCTCAGCTATCCGGTCTTGCTCGGCACCTACTTCCACCTGTCGCTGGAAGTCGCCGACGGCCGCGCCTGGCTGGTGGCCA CCGGCTACGGCGAGGACGAGGCGCTGCGGCCATTCAACACCGAGCTTTGCCTGGGCTCGCTGAAGGTCACCTGCGCCGACCTGCTCGGCCAGCCGCTGCC CTTGCTGGAAGCGGCCTTCGACTATGCCGGCGACGAGGCGATGGCGCGGGCCTACGCCGAGGGTTTCGCCTGCGAGTTGCACTTCGAACGCGAGCGCAGC GCCATCGGCTTCGCCGCCGAATGGCTGGAGCGCCCGTTGCCGCTGGCCGACCCGGTGACCCACCGGGAGATGCTGGAACAGTGCCGGCGGCAGAACATCG ACCTGGCCGCGCGTCGTGCCTGGCTGGACAAGGTCCGGGCGATCCTCGCCGAGCGCTTGCAGGACCCGCCCGGCCTGGAGGAACTGGCCAGGCGCCTGAA CTGTTCGTCGCGCAGCCTGCGCCGGCACCTTCAGCAGCAGCGCACCAGCTACCAGCAATTGCTCGACGAGTTGCGCTTCGCCCGCGCCAAGGAGTTGTTG CAGAGCGGCGACATGCCGATCTACCGGATCGCCGAGGAACTCGGCTTCAGCGAGACCGCCAGCCTGCGCCATGCCTTCCAGCGCTGGAGCGGCCAGCCGC CGAGCCATTTCCGCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGCTCGCTCAGGCGGAGGGGCTGGTGTCGGCGTGGCGCCGTCGCCGTTCGTCCGCCACCTCACTCAGGGATTTTGCCGCGCCGTCGCCAATCCAGGCCA TGAAGGCACGATCGAAGCGTAAGTCGGCGCCGCACAGCCCGACGAGGAAGCGCCGTACGTCCTGGGCGTTGCGCTAGTCGCGGCACACTGCGGTGTCGCG GGTGATGGTGTCGCCGTGCCAGCCGAAGACCATCTGTCGTTTCTCTGCGCGCGCTGGAGCGGGCAGGCCAACGATGGCCTGCCCACGGGCCGTCAGGATG CCGGCTCTTCGATCAGCCGGTCATAGGGCGGCAGGCCGCTGTATTGGCCCAGGGCTTGCTCGTAGGCGTTCTTCAGGTCGTCGGCGGCGAGGTCGTAGCC GACCAGCAACTGTTCGAGTTCAGCGGCGTTCTGCGGGTCGTCGTTCTGCAACTGCGCGTCGAGTTCGCGGGTGCGCGCGGCGACGCACTGGATCGCCACC
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Amino Acid Sequence |
>AraC family transcriptional regulator
MIDSTFSRATWLNSLHMSTLTLSLLEKEGFAREQLLEGSGITPADLLDLRRLISPWQEQQVFANACRLSDEPALGLRLGLRTWISAYGLLGYALLSAPTL GEALRIGLSYPVLLGTYFHLSLEVADGRAWLVATGYGEDEALRPFNTELCLGSLKVTCADLLGQPLPLLEAAFDYAGDEAMARAYAEGFACELHFERERS AIGFAAEWLERPLPLADPVTHREMLEQCRRQNIDLAARRAWLDKVRAILAERLQDPPGLEELARRLNCSSRSLRRHLQQQRTSYQQLLDELRFARAKELL QSGDMPIYRIAEELGFSETASLRHAFQRWSGQPPSHFRA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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