Strain | Pseudomonas aeruginosa strain AZPAE14980 AZPAE14980_contig_7, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGAGACCGTGGACAACAACGAGACCATCACCGTGCATGCCAACCGCAGCAAGACGGTCGACCGCAACGAGACGGTCAGGATCGGCATGAACAAGACGGAA ACCATCCTCATGGCCTCGTTGCAGAACGTCGGCATGGGGCGCATGGAAAACGTCGGGCTCGGCTACAGCCTGAACGTCGGCATGATGATGAACACCGTGG TCGGGCTGAACCAGAGCACCCAGGTGATGAAGAAGAAGACCTTGTCGGTGGGCGATAGCTACGAAGTGAGCGTGGGCGGCAGCGACGATGGCTCTAAGAT CACCCTGGACGGTCAGAGCATCACCCTCGGCAGCCAGCGCATCGAGCTGACCGCCGACCGCGAGATCCTCTTGCGCTGCGGCCAGAGCACGATCCGCCTG ACGCCGGGGGAGATCGAGATCCTCTCGCCCAATGTCGATATCAACTGTTGAGCGGCGGGCGGATGTCCTGTCGCGGCTTTTCCCAAGGAAGGATGGATAG
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DNA Sequence for Gene |
>NS95_RS08635
ATGAGCGGCCTACCGGTTTCCCATGTCGGCGAGAAAGTCTCGGGAGGGGTTATCTCCACCGGCTCGCCCACCGTGCACGTCGGCAGCAGCGCGGTCGGCC TGGCCGACCGGGTGTCCGCCTGCGTGCCGTTGGTGGGCAAGCCGGTCAACCCGATGCTCGGCAGCAAGCTGCTGCCGGAAGAGGTCGATTTCGCCCTGGC GGCGCCGGACACCTTCACCTTCGCCCGTGGCTACCTGTCGAGCAACCCCCGTATCGGCCGGCTCGGCCGGGGCTGGTGGCTGCCGGGCGAGAGCATGCAC CTGGAACTGAGCGAAGACGCCTGCGTGCTGGTCGACGCCCAGGGCCGCCGGATCGGCTTTCCTGCGCTGGCTCCCGGCGCCCAGCATTATTCCGGCAGCG AGGAGCTGTGGCTGCGCCGCGGCGGTTCGAGCGGCGGCGAAGCGCAGGCCTGGCGCGGGCGCTGGGCGGCGGTGCCGGCCGAACTGCAGACGCAGGAGGG CTCCGTGCTGGTGCTGTCCGGCCACAGCTACCTGCATTTCCAGCGTTGCCCCGACGGTATCTGGCGCCTGCAGGCCAGCTTCGGCCGCGCCGGCTACCGC ACCGAGTTCCGCTGGAGCGGACGTGGCCTGCTCACCGGCGTGCGCGACAGCGCCGGGCGCAGCTATGCGCTGGTCTACCAGCAAGCCTGCGAGCCGAGCG AGGGCGACGACGGCCTGCGTCTGTTCGGCGTGATCCTGGCCAGCCACGACGGACCGCCTCCGGACTACATCGATCCGCAGAGCCCGGGGCTCGACTGGCT GGTGCGCTACCAGTTCAGCGACAGCGGCGATCTGATCGCCGTGCGCGACCGTCTTGGCCAGGTGGTCCGGGTATTCGCCTGGCGCGAGCACATGCTGGTC GCCCACGGCGAACCGGGCGGGCTGGAGGTTCGCTACGAGTGGGATGTCCATGCTCCGCACGGGCGGGTCGTGAAGCAGATCGAGGCGGGCGGCCTGACCC GTACCTTCCGCTACCTGCGCGATGCCACCGAGGTCAGCGACAGCCTTGGCCGCGTCGAACGCTACGAGTTCGCCGGCGAGGGCGGGCAGCGGCGCTGGAC CGCGCTGGTCAGGGCCGACGGCAGCCGTAGCGAGTTCGACTACGACCTGTTCGGCCGCCTGGTCGCCATGCGCGATCCGCTGGGACGGGAGACGCGGCGC CGGCGCGATGGCCAGGGGCGGATGCTCGAGGAGGAGTCGCCGGGCAAGGCGCGCTATCGCAAGCGCGTCGACGAAGAGACCGGGCTGCTGGTCGAGCTGG AGGACGCGATGCAGCGCCGCTGGACCTTCGAGCGCGACGAACGGGGCAATGCGACGACGGTGCGCGGCCCGGCCGGCAGCACCCGCTACGCCTACGAAGA CCCGCGCCTGCCCGACCGGCCGACGCGAATCGTCGACCCGCGCGGCGGCGAGCGGCGCCTGGAGTGGAACCGCTTCGGCCTGTTGGCCGCGTTGACCGAT TGTTCCGGCCAGGTCTGGCGTTACGACTACGACAACGAAGGACGTTTGGTCGCCAGCAGCGACCCGCTGGGACAACTGACCCGGCGCCGCTACGACCCGC TGGGGCAACTGATCGGCCTGGAATTGGCCGACGGCAGCGCCCTGAGCTATGAATACGACGCCCTTGGGCGGCAGACCCGTATCGCCGATGCCGAGGGGCA CGCCACGCTGTTTTCCTGGGGGCACGGCGATCTGCTGGTGCGGGTTTCCGACGCCGGCGGCGGCGAATTCTCCTACCTGCACGACGAAGCCGGCAGGCTG GTCGCCCTGACCAACGAGAACGGCGTCCAGGCGCAGTTCCGCTACGACCTGCTGGACCGTCTGGTGGAAGAGACCGGCTTCGACGGTCGTCGCCAACGCT ATCGCTACAACGCCGCTGACGAACTGATCGCCCGCGAGGATGCCGACGGTCGCGAGACCACCTATGCCTACGACCGCGACGGCCGCCTGGCGAGCATCCG GGTTCCCGCCACCGAGCACGCACCGGCCCTGGTCGAGCGTTACCGCTGGTTGGCCGACGGCCGCCTGGCCAGCGCCGGCGGGGCGGATTGCGAGGTGCGC TATACGTACGACGAGGTCGGTAACCTGCGCCTGGAAAGCCAGGTACATGCCGACGGTTGGGTCTACAGCGTCGAGCACAGCCACGACGCGCTAGGCGTGC GCCAGACCAGCCGCTACGGCGACGCGCCGCCGGTCGCCTGGCTGACCTATGGCCCGGGTCATCTGCACGGCGCGCTGGTCGGTGCGGTCGAGCTGGCCTT CGAGCGCGATGCCCTGCACCGTGAGGTGCGTCGCGACGCCCGCCGCGACGGGCAGGATGACGCGTTGTTCACCCAGGAGCGCCAGCACGCGCCGCTGGGA CGCCTGCAGCGCAGCCGCCTGCGTCTGGCCGGCGGTTTCGACTGGCAGCGCGGCTATCGCTACGACGGACTTGGACAACTGGTCGGCATCGACGACAACC AGTATCCGTCGGTGCGCTACGAATACGACCTCGGCGGTCGCCTGCTGGCCAGCCGGCGCGCTGGCGCGGCGGCCAGCACCTACCGCTACGATGCCGCCGG CAACCGCCTGGAGGGCGTCGGCGAGTACGCGCGCGAGGACGCTCGCCAGGCATTCGCCGAGAACGAACTGTACCGCTCCGGTTTCAGTCGCTCCGAGGCG CGCGCGAGCCAGGCCGGCGAAGGCCCGGCGCGCTGGGCCGGCAACCGCGTGGAGAGGATCGCCGGCAACCGCTATCGCTTCGATGCGCTGGGCAACCTGG TCGAGCGTATCGGCGCCGACGGCGAGCGCCTGCGCCTGGCCTACGACGGCGCGCAGCGCCTGGTCCATCTGACGCGCGATTACGCCGACGGTACGCGGCT GGAGGCGCGCTACCGCTACGACGCGCTGTCGCGACGGATCGCCAAGGTGGTGCTGCGCGACGGTGTCGAGCAGCAGGTGCGCTTCGGTTGGGACGGCGAT CGCCAATGCGCCGAAGCCTTTGCGCGGGAACTGCGCACCACCGTTCACGAACCGGGCGGTTTCGTCCCGTTGCTGCGCCTGGAGCAGGCCTGCGAGCCCG ATCCCCCGGAGCTGCTGCAACTGCGCCAGGCGTTCGCCGCCGAGGGCCAGCCGCTGCCGGCGCAATGCGTGCCGGCGCTGGGCGAGGCGCGGATCGCTTT CTTCCACACCGATCACCTCGGTACCCCCCTGCAGCTGAGCGACGAACGTGGCCAACTGCATTGGCAGGGCGTTCCGGACGACTGGCGGGCGGTAGCGCCG GAACGACAGCCGGGTGCGCAGCCGATCCGCTTCCAGGGGCAGTACCACGATGAGGAAAGCGGCCTCTACTACAACCGCTACCGTTACTACCTGCCGGAAG CCGGGCGCTATGCCAGCCAGGACCCGCTCGGCCTGGGCGGTGGGCCCAACCCCTATGCCTACGCGCTGAACGCGCCCACGCTGGCCTACGATCCCACCGG CCTGATCATCCCGCTGGTGGTGATCGGCGCCTTCGCCGCCCGCGCCGCGATCGGAGCGGCGCTGGGCGCCGGCATCGAGCTGGGGATGCAGACCGGCAAG CAGGTGCTGGGGCAGATGAAGGACAACTGGGACAGCGATCGCGACCTCACCGATATCAAGTGGAAGTGCATCGACATCAACTGGAAACACGTCGGCGCCT CGGCGGCCATCGGCACCGTGGCGCCGGGCATGCTCAGCACCGGCAAGACCGTGGTGCAGTCCGCCAAGGCGATCAGGACCCTTTCCGGACAGGCGGCCAA CACCGCCAACCGCGCGGCCAAGCTGGCCGCGCGCAAGGCCGCCCATGCCGATACCATCAAGAAGGCCGTGGCCACCCAGGCCGCCTGGCAGACGGGCAAG CAGATCGTCAAATGCCCGCTGAAGGACGAAGAAGAGGAGTGCCCGCCGCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCAAGCATTACCTGCTGATGACCCTCGTCTGCATACCGCTGGCGTTGCTCTATGTCTGCCTGGAATGGTTCTTCGGCAACACCTGGGTGACCGTCGGGGT GTTCTTCGGCGTGCTCGTCGTGCTGCGCCTCGGGCTCTACCTCTACCGCCGCTCGAAGGGCATCAGGGACGGCTACCTGGACGAGTGAGGCCAACCCGGC ATCGCGGAGCATCGACCCATGCAGGGCCTCTTCGTCAATGGCTCCGCCAGTCTTACGCCGCCGATGCTGTCGCGCAGGCGCTGCTGGCGGCGTTCGCCTG GTAACCTGGCGACCTGCCTGTCTTCTTTGCCAAGGTCCGAGGAGCCGACCATGCACGACCTGCCTACCTACGACGATGTGATCGCCGCCGCTGCGCGGAT CGCCGGGCATGCCAACCGCACGCCGGTGATGTCCTCGCGTACCCTCGACGAAGAACTCGGCGCGGAAGTCTTCTTCAAATGCGAAAACCTCCAGCGCATG
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Amino Acid Sequence |
>hypothetical protein
MSGLPVSHVGEKVSGGVISTGSPTVHVGSSAVGLADRVSACVPLVGKPVNPMLGSKLLPEEVDFALAAPDTFTFARGYLSSNPRIGRLGRGWWLPGESMH LELSEDACVLVDAQGRRIGFPALAPGAQHYSGSEELWLRRGGSSGGEAQAWRGRWAAVPAELQTQEGSVLVLSGHSYLHFQRCPDGIWRLQASFGRAGYR TEFRWSGRGLLTGVRDSAGRSYALVYQQACEPSEGDDGLRLFGVILASHDGPPPDYIDPQSPGLDWLVRYQFSDSGDLIAVRDRLGQVVRVFAWREHMLV AHGEPGGLEVRYEWDVHAPHGRVVKQIEAGGLTRTFRYLRDATEVSDSLGRVERYEFAGEGGQRRWTALVRADGSRSEFDYDLFGRLVAMRDPLGRETRR RRDGQGRMLEEESPGKARYRKRVDEETGLLVELEDAMQRRWTFERDERGNATTVRGPAGSTRYAYEDPRLPDRPTRIVDPRGGERRLEWNRFGLLAALTD CSGQVWRYDYDNEGRLVASSDPLGQLTRRRYDPLGQLIGLELADGSALSYEYDALGRQTRIADAEGHATLFSWGHGDLLVRVSDAGGGEFSYLHDEAGRL VALTNENGVQAQFRYDLLDRLVEETGFDGRRQRYRYNAADELIAREDADGRETTYAYDRDGRLASIRVPATEHAPALVERYRWLADGRLASAGGADCEVR YTYDEVGNLRLESQVHADGWVYSVEHSHDALGVRQTSRYGDAPPVAWLTYGPGHLHGALVGAVELAFERDALHREVRRDARRDGQDDALFTQERQHAPLG RLQRSRLRLAGGFDWQRGYRYDGLGQLVGIDDNQYPSVRYEYDLGGRLLASRRAGAAASTYRYDAAGNRLEGVGEYAREDARQAFAENELYRSGFSRSEA RASQAGEGPARWAGNRVERIAGNRYRFDALGNLVERIGADGERLRLAYDGAQRLVHLTRDYADGTRLEARYRYDALSRRIAKVVLRDGVEQQVRFGWDGD RQCAEAFARELRTTVHEPGGFVPLLRLEQACEPDPPELLQLRQAFAAEGQPLPAQCVPALGEARIAFFHTDHLGTPLQLSDERGQLHWQGVPDDWRAVAP ERQPGAQPIRFQGQYHDEESGLYYNRYRYYLPEAGRYASQDPLGLGGGPNPYAYALNAPTLAYDPTGLIIPLVVIGAFAARAAIGAALGAGIELGMQTGK QVLGQMKDNWDSDRDLTDIKWKCIDINWKHVGASAAIGTVAPGMLSTGKTVVQSAKAIRTLSGQAANTANRAAKLAARKAAHADTIKKAVATQAAWQTGK QIVKCPLKDEEEECPPQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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