Strain | Pseudomonas aeruginosa strain AZPAE14980 AZPAE14980_contig_6, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCTCGACGAAGCGGCCAAGCTGCGCGCGGTCAACGACTTCTTCAACCGGTCGCTGCGTTTCACCGACGACATCGAGATCTGGCAACAGGAAGACTATTG GGCGACTCCGGTCGAGGCGCTGGTCAAGGGCGCCGCCGACTGCGAGGACTACGCCATCGCCAAGTACGTGACCCTGCGTCGCCTCGGCGTCGCCAGCGAC AAGCTGCGCATCACCTACGTCAAGGCCCTGCGCCTGAACCAGGCGCACATGGTGCTGACCTGGTACGCCAGCCCGGGCGCCGACCCACTGGTGCTGGACA ACCTGATCGGCGAGATCCGCCCCGCTTCGCAACGTGACGACCTGTTGCCGGTGTACGCCTTCAATGCCGAGGGCCTCTGGCTGCCCGGCGCCGACGGCGG ACGCCGGACCGGCGACAGCAAGAAGCTGTCGCGCTGGCAGGACCTGCTGACCAAGATGCGCGCCGAAGGCCTCGACCTCGACGCACCCAAGGAGGATTGA
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DNA Sequence for Gene |
>NS95_RS05300
ATGTCACTGCTCAAGCAATTGTTCCTCGCCATCTGCCTGTTCCTCGTCGTCGCCTTCAGCGGCAGCTTCGTCAGCAGCGTGGAGAACTCCCGCGAGCAGT TGCGCGGCCAGTTGCGCTCCCACGCCCAGGACGCCGCCACCGCCCTCGGCCTGTCCCTGACGCCACACGTGGACGACCCGGCGATGGTGCAACTGATGGT CAGCTCGATCTTCGACAGCGGCTACTTCGCCAGCATCCGGGTGATCGACATCAAGAGCGGCAAGCCGCTGGTCGAGCGCGTGCAGGCGCATGCCGAGCGT ACGGTGCCCGGCTGGTTCGAACGCCTGGTGGATCTCCAGCCCCAGGGTGGCGACGCGCTGATCATGCGCGGCTGGGAACAGGCGGCGCGGGTCGAGGTGG TCAGCCATCCGCAATTCGCCCTGGCGCGCCTGTGGGACAGCGCCCTGGGCAGCCTCTACTGGTTGCTGGCCTGCGGCGCGGCGAGCCTGCTGCTTGGCGG CTGGCTGCTGCGCCGCCAACTGCGCCCGCTCGACCAGATGGTGCGCCAGGCCCATGCCATCAGCCGGCGGGAATTCCTCAGCCTGCCCAGGCTGCCGCGC ACGCCGGAGCTGCGCCGCGTGGTGCAGGCGATGAACCAGATGGTGGAGAAACTTCGCACGCTGTTCGCCGAGGAGGCCGCGCGTAGCGACAAGCTACGCG CCCAGGCCTACCAGGACAGTCTCACCGGCCTGCCCAACCGGCGCCTGTTCGACGCCCGCCTCAACGAACAGCTGGGTGCCGGCGAGCACGAGCATGCCGG GCAGCTCCTGCTGCTGCGCCTGAACGACCTGAACGGGCTGAACCAGCGTCTCGGCGGGCAACGCACGGATGAATTGATCCAGGCGGTCGCCCGCTTGCTG GTCGACTCCTGCGGCCAGCAAGGGCGCGCCGACTGGCTGCTGGCCCGCAGCCGCGGCGGCGAGTTCGCCGTGCTGGCTCCCGGTTGCTCCCGCGAGCAGG CCGAACGCCTGGCCGAGGAACTCTGCGAAGGCCTGGAGAACCTTGCCCGCACCGGTGCCAGCGATCTCACGCCGGTCGCCTATCTCGGTATCAGCGCGTT CGCCGAAGGCGACTCGCCAGCGGATCTCCTGGCCCGTGCCGACCAGGCCCTGGCCCAGGCCGAAAGCCAGCCCGCCCAGCCCTGGGCGAGCCAGGACGGC ACCGCGCTCGCGGCGCTCAACGATAGCCAGGACTGGCACGACTGGATCGACCAGGCCCTGACGGAGCGCCGCCTGCTGCTCTATTTCCAGCCGGTGGTGG ACTGCCTGGACACCCAGCGCGTCCTCCACCACAAGGTCCTCGCGCGTCTGCTCGACCCGCAGGCCACGGCCATCGCCGCCGGGCGCTTCCTGCCCTGGAT AGAACGTTTCGGCTGGGCCGCGCGCCTGGACCTGGCGATGCTCGAACAGAGCCTGGAGCACCTGCGGCGCCATCCACGGCCGCTGGCGCTGAGCCTGTCG GCCGCCAGTGTCCGCAATGCGCAGGCGTTTGCCCCGCTACTGGCCCTGCTCAAGGCGCATCCGCAGGAGGCGCGCCAGCTGACCCTGGAACTGGACGAGC GGCACCTGCCAGCCGCGGCCGAACTGGAACGCCTCAGCCAGGTCCTGCGCGAACTGGGCTGCGGTCTCGGCCTGCAGCATTTCGGCGGCCGCTTCAGCCT GATCGGCAACCTTACCCATCTGGGGCTGGCCTACCTCAAGCTGGACGGCTGCTACCTGCACGCCGTCGACCGGGAAGGCGACAAGCGGTTGTTCATCGAA GCGGTCTATCGCACCACCCACAGCATCGATCTACCGTTGATCGCGGAACAGGTGGAAACCCTCGGTGAACTCGAAGTACTGCGGGAAATGGGTTTGCGTG GCGCCATGGGACGCCTGTTCGGCAGCCCGGCGCCCTGGTCCGGGGATGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TAGCGAGTCCGGAGCGGGTCGGACTCGCTTTACAGCGGATTCGGCATCGACGCCAGGCGCTCCCTCTCCGACAGAGAACGCGCCGGCGCGAGCCGACAGG TCCCCGTCATGAAACCGCCAGTCGCTGTTCCACCAGCACTCCCCCGTAAAGCGCGATCTGGGTCTTGGCATTGAGTTCGATGCGCAAGGCCACCGCGCGC TCGATGCCGATCTTCAGGTGCGGACCGAAGCGCGATACGTCCAGGCCGGCACGGATCATCATCTTCTCCACGCCTACGGTGGTTACCGTCACCAGCGTCT GGATGTCGTTCTGCAGGCTGTAGCGGGCCAGCGCGCGCATCGCCTCCAGCGTACAGTCGGAAAAGCCCAGCGAGCCTTTCTGTCCAGAGTTGATGGCGAA ACGGCTGAGTTCCCAGATGTGCGGCGAGCAAGGCGCTTCCTTGCCGTGCAGAAGCTCCGGGAAGGTGTTCTTCAGCATGTAGGGGCCAGTGGTATCGAGA
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Amino Acid Sequence |
>hypothetical protein
MSLLKQLFLAICLFLVVAFSGSFVSSVENSREQLRGQLRSHAQDAATALGLSLTPHVDDPAMVQLMVSSIFDSGYFASIRVIDIKSGKPLVERVQAHAER TVPGWFERLVDLQPQGGDALIMRGWEQAARVEVVSHPQFALARLWDSALGSLYWLLACGAASLLLGGWLLRRQLRPLDQMVRQAHAISRREFLSLPRLPR TPELRRVVQAMNQMVEKLRTLFAEEAARSDKLRAQAYQDSLTGLPNRRLFDARLNEQLGAGEHEHAGQLLLLRLNDLNGLNQRLGGQRTDELIQAVARLL VDSCGQQGRADWLLARSRGGEFAVLAPGCSREQAERLAEELCEGLENLARTGASDLTPVAYLGISAFAEGDSPADLLARADQALAQAESQPAQPWASQDG TALAALNDSQDWHDWIDQALTERRLLLYFQPVVDCLDTQRVLHHKVLARLLDPQATAIAAGRFLPWIERFGWAARLDLAMLEQSLEHLRRHPRPLALSLS AASVRNAQAFAPLLALLKAHPQEARQLTLELDERHLPAAAELERLSQVLRELGCGLGLQHFGGRFSLIGNLTHLGLAYLKLDGCYLHAVDREGDKRLFIE AVYRTTHSIDLPLIAEQVETLGELEVLREMGLRGAMGRLFGSPAPWSGDA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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