Pseudomonas aeruginosa AZPAE14980, NS95_RS22900

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14980 AZPAE14980_contig_24, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCAACCTGCTCGAGATCGATGCGCAGAACCTGGCCAAGGTCATGGCCGTGGTCCAGCGCCTGACCCGCGCCCTGGTCGAGGAGGTGCAGCCGGACGGCGT GCAGGTCGCCCAGTTCAACGGCGCCCCCGCCGGGCAGACGGTCTTCCACATCCATTTCCACGTCATCCCGCGCTTCAGCGGCGAGAATCTCGGCATCCAT GCGGCGAAGCAGGGCGACCCGGAAGTGCTCGCACAACTTCAGGAGCGTTTGGCGCAGCGTCTGCAAGGCTGATTGCGCATGGGCCGGCCCGGTTCGGGGG CGGTCCTTCGCTCGTCGGATTTTTCTGAAATATTTTGTTACATACTGTCGAGGGTCAGGCGCGTCGCGGTTTTCCAGCGATGTGCGCAACAATTTGCACA GTTTTTTTGACGTAGCATCCGCGACATCCCGCTCTTCGGAGCGACCACGGCGAACAGGGACGCCAGCCGTGCAGGTTTTTCGAGCAACAGGGGACAGCGG
DNA Sequence for Gene
>NS95_RS22900
ATGTTCAACCCGGCCAACCAGACCCACTTCAGCCTCACCCTCGACGGCCTCCGCCACGACCTGCAGGTCCTCGCCTTCAACGGCCACGAAGGCATCAGTC GCCCCTACCGTTTCGAACTCGAACTGGTCGGAGAGCGCGCCGGCCTCGACCTCGAAACGTTCCTCCACCGGCCCGCCTTCCTCGCCTTCACCCCGCAGGG CCAGGGTGTCCACGGCCTGGTCTACGGCGCTGCCCAGGGCGATGCCGGCAAGCGCCTGACCCGCTATCGCCTCACCCTCGTCCCACACCTGGCCTACCTC GCCCAGCGCAACAACCAGCGGATCTTCCAGCACCTCACGGTGCCGCAGATCGTCGCCCTGATCCTCGAGGAGCACGGCATCCTCGCCGACGCCTACCGCT TCCAGCTCGGCACCCGGTATCCCGAGCGCGAATACTGCGTGCAGTACGACGAAAGCGACCTGCATTTCGTCCAGCGCCTCTGTGCCGAAGAGGGCATCCA TTTCCATTTCCGGCACAGCGCCGAGGCGCACCTGCTGGTGTTCGGCGACGACCAGACGGTGTTCCCTCGCCTGGGCCGTCCCACCGCCTACGTGCACGAC AGCGGGCTGGTCGCCGACGAACCGGTGATCAAGCGCTTCAGCCTGCGCCTGGCCAGCCGCACCACGCGCACCACCCGCCGCGACTACGACTTCGAGAAGC CGCGGCTGCTGCTGGAGGCCGGCAACCGCCCCGCTGCCGACGCCCCGGCCGAGCCGGACCTGGAGGACTACGACTACCCCGGTCGCTTCGTCGATCGCCA GCGCGGCAAGCTGCTCAGCCAGCGCGCCCTGGAGCGCCACCGCGCCGACCGGCGCCTGGGCGAAGGGGTCAGCGACCAGCCGCTGCTGGTCAGCGGGCAC TTCCTGGAGATCGCCGAGCACCCGCGCGCGGAGTGGAACGACCTGTGGCTGCTCAGCGAAGTCTTCCACGAAGGCAAGCAGCCGCAGGTGCTGGAAGAGA ACGTTACCTCCGACACGTCGGCCAGCACGGACGACTTCCAGCAGGGCTACCGCAACCGCTTCCTCGCGACGCCCTGGGAGGTGTTCTTCCGCCCGCCGCT GGAGCACCCGAAGCCGCGCGTGCTGGGCAGCCAGACCGCGGTGGTGACCGGCCCGCCGGGCGAGGAAATCCACTGCGACCGCTACGGCCGGGTCAGGGTG CAGTTCCACTGGGACCGCGAGGGCCAGGGCGACGACAAGAGCAGTTGCTGGCTGCGCGTAGCCAGCGGTTGGGCCGGCAACGGCTATGGCGGCATCGTCA TTCCGCGGGTCGGCATGGAAGTGCTGGTGGACTTCCTCGAAGGCGATCCCGACCAGCCGCTGGTCAGCGGCTGCGTCTACCACGCCGCCCACCCGGTGCC CTACGAGTTGCCGGCGAACCAGACCCGCAGCGTCTTCAAGAGCCTCAGCAGCCCTGGCGGCGGTGGCTACAACGAGCTGCGCATCGAGGATCGCAAGGGC CAGGAACAGATCTTCGTCCATGCCCAGCGCGACTGGGACGAGAACATCGAGCATGACCAGAAGATCCGCGTCGGCCACGAACGCCACGACACCGTGGAGG CGAACAGCTACAGCGAGTTCAAGGCCGAGGAGCATCACACCGTGCACGGAGAGCGCAAGGTCGAGCTGAAGGCCGATGACCACCTGACGGTCGGCGACAG CCAGCACGTGAAGCTCGGTCGTGCCTACCTGGCCAGGGCCGGGCGCGAGATCCACCTGAAGGCCGGGCAGAAGATGGTGATCGAGGCTGACAGCGAACTG ACGGTGAAGGCCGGCGGCAGCTTCATCCGGCTCGACGCAAGCGGCATCGCCATCAGCGGCCCGCTGGCACGGATCAATGCAGGCGGCGCGCCGGGAAGCG GCTCGGGGATCGCGATCAAGATGCCGCGGGTGCCGGGCATGGCCGACCAGGACAGCTCCGGCGCGCCACCCGAGGCGGTCGCGGCCAACCTGCCGCCGCG GCAACCGGTCTGCGAAGAGTGCCTGCTACAGGCGAAGAAAAGAGGCCAGGCGCTCGCCGAGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAACCGCGATGACGCCGAACCCCCGCCATTGGGCCCGCGAGCTGTGGCAGCGCTCCCGCGATCGCGGCTTGCAGACCCACATCGATGTATTGGTCGATG CCACCGGGCTGGACGACTATCCCTTGCTCGCCGAGCATGCGCGGCAAAGCGATCCTCCGGCGCTGTTCAAATTGCTGGAGCAAACCCCGGAGGCCGCCCT GGCCGACGAGGGCCCGCTGCTGCTGCGCCTGGAAGACGGCCACGCGGCCTGGCTGGACGAACTGCTCGAACGCATCGACTGCCGCCGCCACCTGATGCTC CTGTTCAGCCCCTGGCCGTTGCCGCGCCTGGGCGAGCACCTGCGCAGCTGCACCCAGGCCGAGTGGAACCAGGGTCGTTCCAGCGGCGTACTGCGTTTCT ACGAGCCGGGCCTGTTCATGGCGGTCAGCGACATGCTCGATCCCCGGCAGAGCCGTTACCTGCATGCCCCGGTTTCCAGCTGGCACTGGCTGGACCGCGA
Amino Acid Sequence
>type VI secretion system Vgr family protein
MFNPANQTHFSLTLDGLRHDLQVLAFNGHEGISRPYRFELELVGERAGLDLETFLHRPAFLAFTPQGQGVHGLVYGAAQGDAGKRLTRYRLTLVPHLAYL AQRNNQRIFQHLTVPQIVALILEEHGILADAYRFQLGTRYPEREYCVQYDESDLHFVQRLCAEEGIHFHFRHSAEAHLLVFGDDQTVFPRLGRPTAYVHD SGLVADEPVIKRFSLRLASRTTRTTRRDYDFEKPRLLLEAGNRPAADAPAEPDLEDYDYPGRFVDRQRGKLLSQRALERHRADRRLGEGVSDQPLLVSGH FLEIAEHPRAEWNDLWLLSEVFHEGKQPQVLEENVTSDTSASTDDFQQGYRNRFLATPWEVFFRPPLEHPKPRVLGSQTAVVTGPPGEEIHCDRYGRVRV QFHWDREGQGDDKSSCWLRVASGWAGNGYGGIVIPRVGMEVLVDFLEGDPDQPLVSGCVYHAAHPVPYELPANQTRSVFKSLSSPGGGGYNELRIEDRKG QEQIFVHAQRDWDENIEHDQKIRVGHERHDTVEANSYSEFKAEEHHTVHGERKVELKADDHLTVGDSQHVKLGRAYLARAGREIHLKAGQKMVIEADSEL TVKAGGSFIRLDASGIAISGPLARINAGGAPGSGSGIAIKMPRVPGMADQDSSGAPPEAVAANLPPRQPVCEECLLQAKKRGQALAER
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site