Strain | Pseudomonas aeruginosa strain AZPAE14980 AZPAE14980_contig_2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGGAGGGTTAGCTCCGACTTCAACTGGAACCCCAACACCAGCCGTACCGAGTCGGGCAGTGCAATGTTCCACTACCAGCCGGAAGACAACCCGAACAAA GTGGTCAACGCCGGTTACCGGTACCGTGAAGACGCCCGCCGCTTCAACGGTGCAACTGGTCGGTACATGTACGGCCGTGAAGACGACATCATCAAACAGC ACGACTTCTCGGTCATCTGGCCGCTGGTACCGCAGTGGTCCGTACTCGCCCGCTGGCAGTACGACTATAACAAGAACCGCACACTCGAGGCCTTCGGTGG CTTCGAATACGACAGCTGCTGCTGGAAGCTGCGTCTGATCAACCGTTACTGGCTGGACGTGGATGACGATGCCTTCCTCAACCAAAATGAAAAAGCCGAC CGCGGCATCTTCCTGCAGATCGTCCTGAAGGGCCTCGGCGGCATCGTGGGCAACAAGGCTGAAATGTTCCTCGACAAAGGCATCCAAGGTTATCGTCAAC
|
|
DNA Sequence for Gene |
>NS95_RS02390
GTGAAGATCAAGCTATGTAACCGGCTGCGCCCCCTTGCATTGGGCGCAGCACTCCTTTGCTCCTTCGCGCATGCCGAAGTGGTACCACTGGACCGGGTCG TCGCCATCGTCGACAACGATGTGATCATGCAGAGCCAGCTCGACCAGCGCCTGCGTGAAGTGCACCAGACGCTGCTCAAGCGCGGCGCGCCGCTGCCGCC CGAGCACGTGCTGACCCAGCAGGTGCTGGAACGCCTGATCATCGAGAACATCCAGCAGCAGATCGGCGACCGCTCCGGCATCCGTATCTCCGACGAGGAG CTGAACCAGGCGATGGGCACCATCGCCCAGCGCAACGGCATGAGCCTGGAGCAGTTCCAGGCCGCCCTCACCCGCGACGGCCTGTCCTACGCCGACGCCC GCGAGCAGGTCCGTCGCGAGATGGTGATCAGCCGTGTGCGTCAGCGCCGGGTCGCCGAGCGCATCCAGGTCAGCGAGCAGGAGGTGAAGAACTTCCTCGC CTCGGACATGGGCAAGATCCAGCTTTCCGAAGAGTACCGCCTGGCCAATATCCTGATCCCGGTGCCGGAAGCCGCGTCCTCGGACGTGATCCAGGCCGCC GCAAAGCAGGCCCAGGAGCTTTACCAGCAGCTCAAGCAGGGCGCCGACTTCGGCCAACTGGCGATTTCCCGCTCGGCCGGCGACAACGCCCTGGAAGGCG GCGAGATCGGCTGGCGCAAGGCCGCCCAGTTGCCGCAGCCGTTCGACAGCATGATCGGCTCCCTGGCCGTCGGCGACGTCACCGAGCCTGTCCGCACCCC CGGCGGCTTCATCATCCTCAAGCTGGAAGAGAAGCGCGGCGGCAGCAAGATGGTCCGTGACGAGGTGCATGTCCGCCATATCCTGCTCAAGCCCAGCGAG ATCCGCAGCGAAGCGGAGACCGAGAAGCTGGCGCAGAAGCTGTACGAGCGCATCCAGTCCGGGGAAGACTTCGGCGAACTGGCGAAGAGCTTCTCCGAAG ATCCGGGTTCCGCCCTCAACGGCGGCGACCTGAACTGGATCGATCCGGAAGCCCTGGTGCCCGAGTTCCGTCAGGTGATGAACGATACCCCGCAGGGCGA GCTGTCCAAGCCGTTCCGCTCGCAGTTCGGCTGGCACATCCTGCAGGTCCTCGGCCGTCGCGCCACCGACAGCAGCGAGAAGTTCCGCGAGCAGCAGGCG GTAAGCGTACTGCGCAACCGCAAGTATGACGAGGAACTGCAAGCCTGGCTGCGGCAGATCCGCGACGAGGCCTACGTGGAAATCAAGCAGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCCTGCGCTTCGTGCTCACTCCAGGCGAGCCGGCAGGTATCGGACCCGATCTGTGCCTGCTGCTCGCCCGCTCCGCCCAGCCCCACCCCCTGATCGCCAT CGCCAGCCGCACGCTCCTGCAAGAGCGCGCCGGCCAACTGGGCCTGGCGATCGACCTTAAGGACGTTTCCCCGGCCGCCTGGCCAGAGCGACCGGCCAAA GCCGGCCAACTGTACGTATGGGATACGCCCCTGGCCGCCCCGGTCCGGCCCGGGCAATTGGACCGAGCCAACGCCGCCTACGTCCTGGAAACCCTGACCC GCGCCGGCCAGGGCTGCCTCGACGGGCACTTCGCCGGGATGATCACCGCGCCGGTGCACAAGGGCGTGATCAACGAAGCCGGCATCCCCTTTTCCGGCCA TACCGAATTCCTCGCCGACCTCACCCACACCGCCCAGGTGGTGATGATGCTGGCCACTCGTGGCCTGCGCGTTGCCCTGGCGACCACCCACCTGCCGCTG
|
|
Amino Acid Sequence |
>peptidyl-prolyl cis-trans isomerase
MKIKLCNRLRPLALGAALLCSFAHAEVVPLDRVVAIVDNDVIMQSQLDQRLREVHQTLLKRGAPLPPEHVLTQQVLERLIIENIQQQIGDRSGIRISDEE LNQAMGTIAQRNGMSLEQFQAALTRDGLSYADAREQVRREMVISRVRQRRVAERIQVSEQEVKNFLASDMGKIQLSEEYRLANILIPVPEAASSDVIQAA AKQAQELYQQLKQGADFGQLAISRSAGDNALEGGEIGWRKAAQLPQPFDSMIGSLAVGDVTEPVRTPGGFIILKLEEKRGGSKMVRDEVHVRHILLKPSE IRSEAETEKLAQKLYERIQSGEDFGELAKSFSEDPGSALNGGDLNWIDPEALVPEFRQVMNDTPQGELSKPFRSQFGWHILQVLGRRATDSSEKFREQQA VSVLRNRKYDEELQAWLRQIRDEAYVEIKQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|