Pseudomonas aeruginosa AZPAE14980, NS95_RS19305
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14980 AZPAE14980_contig_18, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCAGCGCCGCTGCGAGTGCGTCGGTTGGCGGCCTGGTCGGCAGCAACGCCGGTTCGATCCTGTCGGCGCGCAGCAGCAGTACCGTCAGCGGCGGCGGGCG CAGCCGCATCGGCGGCCTGGTCGGCGAGAACCAGATCCAGGGACGCATCGTTTCGTCCATGTCGGAAGGCACCGTCAGTGGCGACTACTACGTCTCCATG GGCGGGCTGGCCGGCGTCAACCTGGGATCGATCAAGTACTCCGGCGTTAGCGGCAAGATCGACTTCAAGCCTCAGTCCCATTACGGCCAGATCTACGGTG CGCAGGTCGGCGAGAACCGTGGGGTCCTGGGCGGCAACTACGTGATCGGCGAGGCGGCGCTCCTGCCGCCTGCCGGTATCGACTACGGCAACATCTGGTA AGGCCGGCAGGGGAGGTCCCAGGCGGACCTCCCCTGCCGGCCGGGGCCGCTTTCGCCTGGAGTGCGGCCCTCTTCCGCAGGCGCAATCTTGGAGAGTTCC
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| DNA Sequence for Gene |
>NS95_RS19305
ATGAGCATGAGGTTATTTCCTGGCCGCGTTTCCCTGCGCCGCCGGCCTGGCGCGCAGGCTCGGCAGGCGCTCGTTCTCGGTCTCTGCTGCCTGACCGGCG GCCAGGCCTGGGCCCTGAACGACATCGCCCTGAACTGCTCGTTCGGCAATGGCCAGGGCATGCCCTGGCGTGTGGTGAACGAGCTGACCAGCGGCACGGC GAAAGGCACGGTGCTGTTCGCCAGGCCGGTGAGCCTGTTCCTGAGCTACAAGCCCCAGGCTTCCCAGGAGGCGCATGAGCTGGTCCTCGGGGGGAACTGG TCCGGGGTGGGCTATCCGGGGCCCTACGGCACGGTGGCGTCCGACGTCAAAGGCATCGGCTATCGGATCTCGGTGGATGCCCAGGACGGCGTCAAGCGGG TGATTCCGGTCGACAACCAGCCCCATGCGCTGGACAAGCGAGTCACGAGCTTTTCCGGAAGCACGACCAGCGACTACCTACAGGAACTGGTCCTGACGGT CGACCCCGGCGAGTTGCCTGCCGGCGACCTGAAGGTAACCAGCGTATCCGGCAGCGCCACCCTGAATCTCTGGGCGGTGGACAGGCTGAAGGGCGAAGCG TCCATCGGCAGCGTCCTGGCGGTGCCTGCGGACAACTACCCCACCGGGGTTTGCCGAAAGCCCTATTCGCTGATCGGCCCGGCCTCCATCGCTATCGGCG GCGGTCCCCCGCCGCCGCCGATCCCGAAGAAATGCAAGGTCGAGGTGGGACGGGAAATCAACGTCAAACTGGGTAGCGTCGCGTTGAAGAATTTCCCGCG GGTCAACGACACCTCCACGGAGCGCTCCTTCAATATCTCTCTCAGCGAGTGTGCGGCGCTGGCCAAGCCGGAAATCGCTTTCCGCGACAAGTATGTCTCG GCGCAGCAAGCGGACCCGACGATCCTCAGCTTGAAGAGCGGCGGCGCGGCGGGGTTCGGCATCGTCGTGAAGAACGGCCTGGACCAGCAGCGGATACGTT TCGACGGCACGCCCTACCCGATGCGGCGTGTCGGCGACAGCGCCGACCTCCCGCTGAGTGCCGCCTACATCCGTATCGGCGCGGAGGGCGAATTGAAGGC CGGGGTCGCCGACGGCGCCGCCGAGTTCACGTTTACCTTCCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGCGCCGCCGTTCTTTCCCCGGCGTTTCCCGCCCCGCCTCGGGAAGCGCCGTCGGCCGCTTTCGCGCCAGCCCTCGCGAAGGCTCGGCCCCTCACCTC CAGTGGTTGCAGATCGCCGAAGGCGCTCTGCATATCGCTCCGCTGCTCGTCCTGGGTCTCGTGCGCACATGCCATTCCCGCACGCGGAATACCGATATTG CGTATGGACGAAGGCTTTCTGAGGGATATGCAAGTTTCCTCGGTAGGATTTCGCGCAAATAAAAGAACGCTATTTTCCAGGCGATAGTTTCAGCTTGTCA CGGAACTCTTTTTTCAAACTTTTTGCTGCTCTGGCTTGTCCGTTTCGTATTTCATCGTTTTCATAAGTGTCTACGTATACGTTTTTCGGGGGCTGTTTCA AGTGTCTTTGTTGTTAGTTTGCGAGGCGAAAAAATAGTAGTTTTACTATATTAAATATCGTCGGTTTCACTAGAAAATACACATGTTCACTTTGAACCGG
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| Amino Acid Sequence |
>fimbrial protein CupB6
MSMRLFPGRVSLRRRPGAQARQALVLGLCCLTGGQAWALNDIALNCSFGNGQGMPWRVVNELTSGTAKGTVLFARPVSLFLSYKPQASQEAHELVLGGNW SGVGYPGPYGTVASDVKGIGYRISVDAQDGVKRVIPVDNQPHALDKRVTSFSGSTTSDYLQELVLTVDPGELPAGDLKVTSVSGSATLNLWAVDRLKGEA SIGSVLAVPADNYPTGVCRKPYSLIGPASIAIGGGPPPPPIPKKCKVEVGREINVKLGSVALKNFPRVNDTSTERSFNISLSECAALAKPEIAFRDKYVS AQQADPTILSLKSGGAAGFGIVVKNGLDQQRIRFDGTPYPMRRVGDSADLPLSAAYIRIGAEGELKAGVADGAAEFTFTFP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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