Strain | Pseudomonas aeruginosa strain AZPAE14980 AZPAE14980_contig_18, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGGCCGTTCACCGCCGACGGCAGCTTGCCGGGCGCGGGCGGCTGTTTCGACGGAGCGGCCGGTGCGGCGGGCTCGACCTGGATCGCGGGAATTCTTTCGC TCATTTTTCGTAGGCCCATCAGGCTGGAGAGGCGGTTGCGACTATAGGAACCGGCTGATGGGCGAAACAGCGGCAGATCGAGCGGGAAAAACCGTATCAG ATGCCTCCGGAAAGCAGCGGCCCAGCATTGCCGCGGGTTGCCGGGCGACCTCGGGCAGTACAGATATGCGCCCCGTGGCAACCGGTCGCAGGCGGCACGA ATTCGCCGCCGTCGGCCATCTGATGTGTTTTTTTCGGCGGAATCTGCCGCTGTTTCGCTGTCTGTACGCGGGCGATAGTGGGTGCCAGTGAACACCGGCC CATCCTGTCGCCAGAAACAGGGGCGCAGCCGGTCCCCGGTTTCTTCGCCACGCACCCTGCCCGTCATCGGTGGAGAAACCCTGTCGATGAGGGCTTTGCG
|
|
DNA Sequence for Gene |
>NS95_RS19050
ATGTACCAGTACGACGAATACGACCAGGCGCTGGTGAGCGAGCGGGTGGCGCAGTTCCGCGACCAGATCGCCCGCCGCCTCGACGGCGAACTGAGCGAGG AGGAGTTCCTCCCGCTGCGCCTGCAGAACGGCCTGTACCTGCAGAAGCACGCCTACATGCTGCGCGTGGCGATTCCCTACGGCACCCTCTCGTCGCCGCA ACTGCGCGCCTTGGCGCACGTCGCCCGGCACTACGACCGCGGCTACGGGCACTTCACCACGCGGCAGAACATCCAGTTCAACTGGATCGAACTGGAGCAG GTCGGCGATATCCTCGAACACCTCGCCGGCGCGCAGATGCATGCGATCCAGACCTCCGGCAACTGCGTGCGCAACATCACCACCGAAGCCTTCGCCGGGG TCGCCGCGGACGAATGGACCGACCCCCGGCCGCTGGCCGAGATCCTGCGCCAGTGGTCGACGGTGAACCCGGAGTTCCTGTTCCTCCCGCGCAAGTTCAA GATCGCCCTCAGTTCGGCGGTGGAAGACCGCGCCGCGGTGCAGATGCACGACATCGGCCTGTACCTTTACCGCCACCCCGACGCCGGCGAGTTGCGCCTG CGGGTCCTGGTCGGCGGCGGCCTGGGACGCACGCCGATGCTCAGCCAGGTGATCCGCGACGACCTGCCCTGGCAGCACCTGTTGTCCTACGTCGAGGCGA TCCTGCGGGTCTACAACCGCTACGGCCGGCGCGACAACAAGTACAAGGCGCGGATCAAGATCCTGGTCAAGGCGCTGGGCATCGAGGCTTTCGCCCGCGA GGTGGAGGAAGAGTGGCAGCACCTGCGCGACGGCCCGGCGCAACTGACTGCCGAGGAGTGCCAGCGGGTCGCCGAGCGCTTCGTATTGCCGCGCTACCTG CCGCCGGCCGGCGGCGAGCTGGCCTACGGCAGCGCCCGTGCGGCCGATCCGGCCTTCGCCCGCTGGGCCTCGCGCAACGTCCAGGCGCACAAGGTGCCGG GCTACGCCTCGGTGGTGCTGTCGACCAAGCCCGGCGCCAGCGCGCCGCCGGGCGACGTCACCGCGGAGCAGATGGAACGTGTCGCCGACTGGGCCGAGCG CTACGGTTTCGGCGAGATCCGTGTGGCCCACGAACAGAACCTGGTGCTCCCCGACGTGCGCCTGGAGAACCTCCACGCGCTGTGGCGCGAGGCCTGCGCA GCCGGCCTCGGCACGCCTAACCAAGGCCTGCTCAGCGACATCATCGCCTGTCCCGGCGGCGACTACTGCGCGCTGGCCAACGCCAAGTCGATCCCCATCG CCCAGGGTATCCAGCAGCGCTTCGAGGACCTCGACCACCTGCACGACATCGGCGAGCTTAGCCTGAACATCTCCGGCTGCATGAACGCCTGCGGCCACCA CCACATCGGCAACATCGGCATCCTCGGCGTCGACAAGAACGGCAGCGAGTGGTACCAGGTCACCCTCGGCGGCGCCCAGGGCAAGGACAGCGCGCTGGGC AAGGTGATCGGGCCATCGTTCAGCGCTGCCGAGGTGCCGGCGGTGATCGAACGGATCGTCGAAACCTTCACCGACCTGCGGGTCGGCCCGGAACGTTTCA TCGACACCTTCAACCGGGTCGGCCTGGAGCCGTTCAAGGCCCGGGTCTACGCCAGGATGGAGGAACCGGCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
ACAACCTGATCCGTTTGCGCGATGGCGTCGCCGAGGTCTGCCGCGACGATCCCTGGCAACTCCTGCGCGAGTTGCCCGACGCGCTGCCGCCGGGGCCGTT GCTGCTGCCTCTGGCGGCCTGGCTGGAGCGCCGCGGCGAGGCCGGAGCCGCCGCGCCCTGGCTGGCGCCGGACGATGAGGTGGAGGCCTTGCTGCCGCAC TTCGCCGAGCTGCCGCTGATCGCCGTCGACTTCCCCAGCTTCCGCGACGGTCGTGGCTACAGCCTGGCCTACCTGCTGCGCGTGCGCCTGGGGTGGAGCG GCGAGTTGCGCGCAGTGGGCGACGTGTTGCGCGACCAGCTCAGCCATATGCGCCAGTGCGGCTTCGATGCCTTCGCGGTGCGCGAGGACAAGAACGTCGA GGATGCGCTCAAGGGGCTGGCGGGCTTGAGCGTGCTCTACGGCCGCTCGGCGATCGAGCCGCGACCGTTGTTCCGCCGACGCTAGGCATACGCCCCCGGA
|
|
Amino Acid Sequence |
>sulfite or nitrite reductase
MYQYDEYDQALVSERVAQFRDQIARRLDGELSEEEFLPLRLQNGLYLQKHAYMLRVAIPYGTLSSPQLRALAHVARHYDRGYGHFTTRQNIQFNWIELEQ VGDILEHLAGAQMHAIQTSGNCVRNITTEAFAGVAADEWTDPRPLAEILRQWSTVNPEFLFLPRKFKIALSSAVEDRAAVQMHDIGLYLYRHPDAGELRL RVLVGGGLGRTPMLSQVIRDDLPWQHLLSYVEAILRVYNRYGRRDNKYKARIKILVKALGIEAFAREVEEEWQHLRDGPAQLTAEECQRVAERFVLPRYL PPAGGELAYGSARAADPAFARWASRNVQAHKVPGYASVVLSTKPGASAPPGDVTAEQMERVADWAERYGFGEIRVAHEQNLVLPDVRLENLHALWREACA AGLGTPNQGLLSDIIACPGGDYCALANAKSIPIAQGIQQRFEDLDHLHDIGELSLNISGCMNACGHHHIGNIGILGVDKNGSEWYQVTLGGAQGKDSALG KVIGPSFSAAEVPAVIERIVETFTDLRVGPERFIDTFNRVGLEPFKARVYARMEEPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|