Pseudomonas aeruginosa 2192, PA2G_01735

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0044010 single-species biofilm formation
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA2621
 ECO:0000249
sequence similarity evidence used in automatic assertion		 22123702
Biological Process GO:0071978 bacterial-type flagellum-dependent swarming motility
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA2621
 ECO:0000249
sequence similarity evidence used in automatic assertion		 22123702
Biological Process GO:0044011 single-species biofilm formation on inanimate substrate
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA2621
 ECO:0000249
sequence similarity evidence used in automatic assertion		 22123702
Biological Process GO:0071236 cellular response to antibiotic
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA2621
 ECO:0000249
sequence similarity evidence used in automatic assertion		 22123702
Biological Process GO:0030163 protein catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02617
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR33473
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other 2192 genes in this class
Antibiotic resistance and susceptibility Other 2192 genes in this class
Motility & Attachment Other 2192 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF54736 ClpS-like IPR014719 Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like 2 76 5.75E-29
Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. IPR022935 ATP-dependent Clp protease adaptor protein ClpS 1 72 23.678886
Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS IPR003769 Adaptor protein ClpS, core 2 73 2.2E-31
Gene3D G3DSA:3.30.1390.10 - IPR014719 Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like 1 78 9.1E-35
FunFam G3DSA:3.30.1390.10:FF:000002 ATP-dependent Clp protease adapter protein ClpS - - 1 77 2.0E-39
PANTHER PTHR33473 ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC IPR022935 ATP-dependent Clp protease adaptor protein ClpS 2 78 8.5E-14

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.