Pseudomonas aeruginosa AZPAE14840, NR58_RS11920
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14840 AZPAE14840_contig_8, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCACCGGCAGCCCGGACGCGGTACGCCTGGAACATCGCGTCGCCGGCGCCGACGCCAACCCATACCTGCTGCTGGCCTCGGTGCTTGCCGGGGTGCACCA CGGGCTGACCAACAAGGTCGAGCCGGGTGCCCCGATCGAAGGCAATTCCTACGAGCAGTTGGAGCCGAGCCTGCCGAACAACCTGCGCGACGCCCTGCGC GAACTGGACGACAGCGAGATCCTGGCGAAGTACATCGATCCGAAGTACATCGACATCTTCGTCGCCTGCAAGGAAAGCGAGCTGGAGGAGTTCGAGTACT CGATCTCCGACCTCGAGTACAACTGGTACCTGCACACCGTGTGAGCATGGGCGGGCGGCTCCGGTCCGGCGCCGCCCGCCCGTTCTTCCGTCGAGGTTCC CACCCTTGCTGAAGGTAGACGGCGGCAAGCCTGCGGTTTCCGCCCGTCCGCCTTCCTTTGCTGTGCATTAGAAAAAGAAGAAATCGAGGCAAGCATACCC
|
|
| DNA Sequence for Gene |
>NR58_RS11920
ATGTCGAATCCTCCCCCCACCGCAGAACGAACCCAGCTTCGCAAGTCCCTCAAGCTGTGGCAGATCGTCATGATCGGGTTGGCCTACCTGACCCCGATGA CCGTCTTCGACACCTTCGGCATCGTATCCGGGATTTCCCAGGGACACGTGCCCACCGCCTACCTGCTGGCCCTCGCCGGCGTGCTGTTCACCGCGATCAG CTACGGCAAGCTGGTCCGCCAGTTCCCCACCGCAGGCTCGGCCTATACCTACGCGCAACGGGCGATCAATCCTCATGTCGGCTTCATGGTCGGCTGGTCG TCGCTGCTGGACTACCTGTTCCTGCCGATGATCAACGCGCTGCTGGCGAAGATCTACCTGACCGCACTGTTCCCCGAGGTCGCGCCATGGGTCTGGGTGG TGATGTTCGTGCTGATCATGACCCTCATCAACATCAAGAGCGTGAACCTGGTCGCCAATTTCAACACCGTCTTCGTGCTGGTCCAGCTGGCGATCATCGT GGTCTTCATCGGCCTGGTGATCCATGGCCTGAACAACGGGGAGGGGACCGCCACGGTGCTCAGCACCCAGCCGTTCTTCTCCGAGCACGCGCATCTCTCG GCGATGGTGGCGGGGGCGACGATCCTCTGCTTTTCCTTCCTCGGTTTCGACGCGGTGACCACGCTGTCCGAGGAAACCCGCGACGCCGCCAAGGTGATCC CGCGGGCGATCTTCCTCACCGCGCTGTACGGCGGGGTGATCTTCATCACCGTGTCGTATTTCCTGCAGTCCTATTTCCCGACCAACGTCCGCTTCAAGGA ACCCGACGCGGCGTTGCCGGAAATCGCCCTCTACGTCGGCGGCAAGCTGTTCCAGTCGATCTTCCTCTGCGCCACCTTCATCAATACCCTGGCGTCTGGC CTGGCCTCCCAGGCCAGCGTGTCGCGCCTGCTGTACGTGATGGGGCGGGACAACGTGCTGCCGGAGCGGATCTTCGGCTTCGTCCATCCGAAATGGCGCA CGCCGTCGATCAACGTGCTGATCGTGGGCATGGTGGCGCTTTCGGCGATCTCCTTCGACCTGGTGACGGCGACCGCGCTGATCAATTTCGGCGCTCTGGT GGCCTTCACCTTCGTCAATCTCTCGGTGATCGTGCATTTCTATGTGCGCGGCGGGCGCAACCGCAGCCTCAAGGAGCATTTCCACTACCTGGTCCTGCCG CTGCTCGGCGCGGCCATCGTCGCGGTGCTCTGGCTCAACCTGGAAAGCACCTCGCTGGTGATGGGACTGATCTGGGCCGGGCTGGGCTTCGGCTACCTGT TCTACCTGACCCGCAGCTTCAGCCGTCCGCCGCCGCGCTTCCAGGAGAGCGAGCTGAGCCCGACCCAGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGCGAGCGGTGAATGGATTCAGCGAAAAAGTGAAGGAAAAAGATTGGTAATCTTCACGAAATTTTCACGGTGACGGGTCAATCATGGACCCATGGCTAAC GGACTAGCCCCCCATCTGAAGCCCGCCTCACGGCGGGCTTTGGCTATCTGCAGACAGCGAATTCCGCGTTTTCCCTCCTTTTCACAGGGGTTTCCGGCCT CCCGGCTGGCAATGCGCCTGCGACGACATGTCCGAATCCAGACAGAATTGGACGCCCCCAAAAAGCGCAGACACGGCTAGAATCCACGCCGTCCCGATCC GGTTCGATGGCCGTGGCGGGGGAGCCTGGTATCCGCTGGTCGGTGTTTCCTGTGGTGCTGTGCGTCCTTCCCTAGACTACCCGGCTCGCTCGAACCATCC CTTCGCGGGGGCGGAACGGCACAGGGTCGTTCGGCATGGAAGCTGCCTGGGCCGGCCTTCGACACACCTATAAGAGTAGAAATCTGCATGACATACCCTG
|
|
| Amino Acid Sequence |
>lysine-specific permease
MSNPPPTAERTQLRKSLKLWQIVMIGLAYLTPMTVFDTFGIVSGISQGHVPTAYLLALAGVLFTAISYGKLVRQFPTAGSAYTYAQRAINPHVGFMVGWS SLLDYLFLPMINALLAKIYLTALFPEVAPWVWVVMFVLIMTLINIKSVNLVANFNTVFVLVQLAIIVVFIGLVIHGLNNGEGTATVLSTQPFFSEHAHLS AMVAGATILCFSFLGFDAVTTLSEETRDAAKVIPRAIFLTALYGGVIFITVSYFLQSYFPTNVRFKEPDAALPEIALYVGGKLFQSIFLCATFINTLASG LASQASVSRLLYVMGRDNVLPERIFGFVHPKWRTPSINVLIVGMVALSAISFDLVTATALINFGALVAFTFVNLSVIVHFYVRGGRNRSLKEHFHYLVLP LLGAAIVAVLWLNLESTSLVMGLIWAGLGFGYLFYLTRSFSRPPPRFQESELSPTQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|