Strain | Pseudomonas aeruginosa strain AZPAE14840 AZPAE14840_contig_6, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTTTCGCGAGCGCTGGCATGGCTTCCTGCTGCGCGTGCCGCTGGTCGGTCGGCTGGTGCGTTCCACCGACACCGCGCGCTTCGCCTCGACCCTGGCGATC CTCACCCGCAGCGGCGTGCCGCTGGTGGAGGCGCTGGCGATCGCCGCCGAGGTGATCGCCAACCGGATCATCCGCAACGAAGTGGTCAAGGCCGCGCAGA AGGTCCGCGAGGGCGCCAGCCTGACCCGCTCGCTGGAAGCCACCGGACAGTTCCCGCCGATGATGCTGCACATGATCGCCAGCGGCGAGCGCTCCGGCGA GCTGGACCAGATGCTGGCGCGCACCGCGCGCAACCAGGAGAACGACCTGGCGGCGCAGATCGGCCTGATGGTCGGCCTGTTCGAACCGTTCATGCTGATA TTCATGGGCGCGGTGGTGCTGGTCATCGTCCTGGCCATTCTTCTTCCGATCCTTTCTCTCAACCAACTCGTGGGGTAATCGCGTGAATCAGAGCCGCCCA
|
|
DNA Sequence for Gene |
>NR58_RS11045
TTGCAGCGTCGCCAACAGTCGGGCTTCACCCTGATCGAAATCATGGTCGTGGTGGTCATCCTCGGCATCCTCGCCGCCCTGGTGGTGCCGCAGGTGATGA GCCGTCCCGACCAGGCCAAGGTCACCGTGGCCAAGGGCGACATCAAGGCCATCGCTGCCGCGCTGGACATGTACAAGCTGGACAACTTCGCCTATCCGAG CACCCAGCAGGGCCTCGAGGCGCTGGTGAAGAAGCCCACCGGCAATCCGCAGCCGAAGAACTGGAACAAGGACGGCTACCTGAAGAAGCTGCCGGTCGAT CCGTGGGGCAATCCCTACCAGTATCTGGCGCCGGGCACCAAGGGCCCGTTCGACCTGTATTCGCTGGGCGCCGACGGCAAGGAAGGCGGCAGCGACAACG ACGCCGACATCGGTAACTGGGACAACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CCGGACATGCGGGCTTCGCGCGGCTTCACCCTCATCGAGCTGATGGTGGTGATGGTCATCATCAGCGTGCTGATCGGCCTGGCGGTGCTCAGCACCGGCT TCGCCAGCACCTCGCGGGAGCTGGACAGCGAGGCCGAGCGGCTCGCCGGGCTGATCGGCGTGCTGACCGACGAGGCCGTGCTGGACAACCGCGAGTACGG CCTGCGCCTGGAGCGCGATGCCTACCAGGTACTGCGCTACGACGAAGCGAAGGCGCGCTGGTTGCCGGTGGCGCGCGACAGCCACCGCCTGCCGGAGTGG GCGGAGCTGACCTTCGAGCTGGACGGCCAGCCGCTGGTGCTGGCCGGCAGCAAGGGCGAGAAGGAGCAGAAGAAAGGCACCGACCAGCCGCAATTGCTGA TCCTCTCCAGTGGCGAACTCAGTCCGTTCCGCCTGCGCCTGGCCGAGCGCGGACCCGAGGGGCGGGCGTTGTCGCTGAGCAGCGACGGTTTCCGCCTGCC
|
|
Amino Acid Sequence |
>type II secretion system protein G
MQRRQQSGFTLIEIMVVVVILGILAALVVPQVMSRPDQAKVTVAKGDIKAIAAALDMYKLDNFAYPSTQQGLEALVKKPTGNPQPKNWNKDGYLKKLPVD PWGNPYQYLAPGTKGPFDLYSLGADGKEGGSDNDADIGNWDN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|