Strain | Pseudomonas aeruginosa strain AZPAE14840 AZPAE14840_contig_4, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAGACGGGTCTTGGTGTCGGCGAGCTTGATGTCGCGGGCCAGTTCGGGGGTCAGCTTGCCCTGTTCCTCGATGCTGGCGAGGATCGCGCCGCGGCGTTCT TCCAGTTCGCGCAGGTAGCGCAGGCGCTCTTCCAGCATGCGCAACTGGGTATCGTCGAGGCTGCCGGTGACCTCTTTGCGGTAACGGGCGATGAAAGGAA CGGTGGAGCCTTCGTCGAGCAGGGCGACGGCAGCGGCGACTTGCTGCGGTTGAACGCGGCCGGAGGGCAGTGCGGAGAGCTCTTCGGCGATACGGGTGTT GATGCTGTCCATTGATCCACCTGGTAAAACGAACGAAAACGGGCCGTGTAGACAACGCCCCGCCGCAAAAGCGCCGCATTATACCTGCCAAGTTTCGCCT TGGAGGGCGGCTGGTCGGGGAAAAATCTGCTAACAATGGACAGTCCGGCCCAGCCGCTACCTGGGCGATAATGCCCGCCTGACTCATTCTGGGAGTTTCT
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DNA Sequence for Gene |
>NR58_RS03710
ATGTCGAACCCTGCCGCCCTGGCCGAAGGTGAAAAGATCCTCGTCGTCGACGACGACGCCCGCCTGCGCCGCCTGCTCGAACGTTTCCTCGACGAGCAGG GCTACCGCGTCCGCGCGGTGGAGAACACCGAGCAGATGGATCGCCTTCTATCCCGCGAACTGTTCCAGCTAGTTGTGCTCGACCTGATGCTTCCCGGCGA GGACGGCCTCACTGCCTGCCGCCGCCTGCGCGAACAGAACAACCAGGTGCCGATCATCATGCTCACCGCCAAGGGCGACGAGGGCAGCCGCATCCAGGGC CTGGAACTGGGCGCCGACGACTACCTGGCCAAGCCGTTCAACCCGCGCGAACTGCTGGCGCGGATCAAGGCCGTGCTGCGCCGCCAGGCGCCGCTGGTGC CCGGCGCGCCTGCCGGTGCCGACGAGGTGGTGACCTTCGGCGACTACCAGCTGTTCCTCGCCACCCGCGAACTGAAGAAGGGCGACGAGGTACACATGCT GACCACCGGCGAGTTCGCCGTGCTCAAGGCCCTGGTGCAGCACGCCCGCGAACCGCTGACCCGGGACAAGCTGATGAACCTCGCCCGTGGCCGCGAGTGG GATGCCCTGGAGCGTTCCATCGACGTGCAGATCTCGCGCCTGCGCCGGCTGATCGAGCCGGACCCGTCCAAGCCGCGCTATATCCAGACGGTCTGGGGCG TCGGCTACGTGTTCGTGCCGGACGGCAACGCGCGCAAGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTCTCCGCGCGGCCGGTGCAGCGATGCACCGGCCGCGTCGTCTTACCCGCAACAGGCGTCGGCCCCGTCCGCCGGCGCGCAACCGGTCCGATCGATGAAA ACGCCGCTCTGGTTCCCGCAAAGCTTCTTCGCCCGCACCCTCTGGCTGGTGCTGATCGTCGTGCTGTTCTCCAAGGCGCTGACCCTGGTCTACCTGCTGA TGAACGAGGACGTGATCGTCGACCGCCAGTACAGCCACGGCGCGGCGCTGACCATCCGCGCGTTCTGGGCTGCCGACGAGGAGTCGCGCGCGGCCATCGC CAAGGCTTCCGGCCTGCGCTGGGTGCCGAGCAGCGCCGACCAGCCCGGCGAGCAGCACTGGCCGTACACGGAAATCTTCCAGCGGCAGATGCAGATGGAG CTGGGGCCGGACACCGAGACCCGCCTGCGTATCCACCAGCCGTCGCAGCTCTGGGTGCGCGCACCGAGCCTCGGCGAAGGCTGGCTGGCGGTGCCGCTGT
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Amino Acid Sequence |
>transcriptional regulator
MSNPAALAEGEKILVVDDDARLRRLLERFLDEQGYRVRAVENTEQMDRLLSRELFQLVVLDLMLPGEDGLTACRRLREQNNQVPIIMLTAKGDEGSRIQG LELGADDYLAKPFNPRELLARIKAVLRRQAPLVPGAPAGADEVVTFGDYQLFLATRELKKGDEVHMLTTGEFAVLKALVQHAREPLTRDKLMNLARGREW DALERSIDVQISRLRRLIEPDPSKPRYIQTVWGVGYVFVPDGNARKA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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