Pseudomonas aeruginosa AZPAE14840, NR58_RS30025

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14840 AZPAE14840_contig_35, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGTGCGCCTGGGCGCCGACGGCGAAGCGCGCCGGCTGGCCTTCGACGGCCTGCCGGACGCCTGGACCCGCGGCATGCTGATGGCCGACCGGATGCCGCTG GCCGAGGTGCTCGCCGAACTCGCCCGCTACCGTCGCGGCTTACTGCGCTGCGACCCGCAACTGGCCAGGCTGGCGGTGTCGGGCGCCTATCCGCTGCTGG ACCTGCGGCGCACGCTGGGCATGCTGCAGGCCACCTATCCGCTGAAGGTGCGCGGGGTGACCGACTACTGGATCAGCCTGGTGCCGGCGTGACGGCGCGG CCGCCATCCCCGTGGCAACCGCCCCCTCGCGTCCACCCCGGCAGGCCGTCCGCCGTTGCGCCGGAACAGGCGTTGCCATCGACATACCGGGCTCCGCAGA AAAATAACCGCCTCGACCTGAGACCTTTTTCCTTCTCGGCTGGCAAGTAGAGGAATCCGCCCCGACCCAAGGTCCGCAGAGACCACGAGGAACCCTGTAC
DNA Sequence for Gene
>NR58_RS30025
ATGCCCGTACGCACGCTTCGCCCCCGTTCGCTGTCCCTGGCCATCCACGCCGCCGCCATGACCCTCGCCCTCGCCGGCGCGGCCCCCGCCCTGCTTGCCG CCGAGGCGCCCGCCGCCAGCTCGGCGCGCAGCTATGACATCGCCCCCGGCCCGCTCGGCCGTACCCTGTCGGCCTTCGCCAGCGACAACGGGGTATCCCT GGCGTTCGACCCGGCGCTCACCGAGGGTCGCCGCAGCGCCGCCCTGCGCGGCCGCTACGCGCCGGTCGAGGCGCTGCACCGCCTGCTGCTGGGCAGCGGC CTGGAGTTGCAGCAGCGCAGCGATGGCAGCTACACCCTGGTGCCGGCAGCCACCGATGGCGCGCTGGAACTGCAATCCTCGCTGATCACCGCCCAGGCCG CCGGTGCCGAGACTCTGCCCGCCGAGTACGCCGGCGGCCAGGTGGCCCGTGGCGCGCGCCTGGGCATGCTGGGCAACGCCGACGTGATGGATGCGCCATT CAGCATCACCAGCTACACCGCCAGGACCATCGAGCAGCAGCAGGCGCGCAGCGTCGCCGACCTGCTACAGGCCAACGATCCGTCGGTGCGGGTGGTCGGC GGGCGCGGCGACCTGGTGGACAGCTACACGATTCGCGGCTTCAGCGTGCAGAACGCCGACGTCGCCTTCAACGGCCTCTATGGCCTGCTGCCGTTCTGGC GGGTACCGATCGAGTTCGCCGAGCGCGTGGAAGTGCTCAAGGGACCGAACGCCCTGCTCGGCGGGATTTCCCCCGGCGGCAGCGTCGGCGGCACCATCAA CCTGGTGCCCAAGCGCGCCGACGACCAGCCGCTGACCCGCGTCAGCGTCGACTGGACCCAGCGCGGCCAGCTCGGCACTCACCTCGACATCGGCCGGCGC TTCGGCGAGAACAACGCCTTCGGCGTGCGCTTCAACGGCGTCTACCGCAACGGCGATACCGCCGTCGACCATCAGAGCCGCGAGTTTCCCATGCTCTCCC TGGGCCTGGACTTCCGTGGCGAGCGCCTGCGCCTGTCCAGCGACCTGCTGTACCAGAAGGAAAGCCTGGAAGGCGTGGTGCGCCCGCTGCTGACCGGCCC GGGAACCACCCACATCCCCCACGCCCCGGACTCGAAGACACGCTTCGGCCTGCGCGATTCCTACCTGGACCAGGAGGATTACTCCATGGTCAACCGCGGC GAGTACGACCTCGCCGACAACCTGACGGCGTTCGCCAGCATCGGCGGCCGCCAGAGCAACTACGAAACCATCGCCGCCAACAGCATCCTCGTCGGCAACC AGGGCGATATCGTCAACAGCCTGGCACGCCAGCGCGGCGACCGCCGCACCTATTCCGCCGAGGTCGGCCTGCGCGGCAACTTCGACACCGGCCCGCTCCG CCACGACTGGACGCTCAGCGCCAACCGCCTGCACGAACGGCTGGGCATGGTCTATGCCTTCACCGGGATGCAGCCGGGCAACCTCTACCAGACCTCGCCG CATACGCCGCTGCCGGACTTCTCCAGCCTCGACGGGAGCATTCCGAAGACCAATGAAACCGACCTCGGCGGCGTGGCGCTGGCCGACAGGCTGTCGTTCC TCGAGGATCGCGTGCAGGTCACCCTGGGCGTGCGCCGCCAGCAGATCGAGTCGCGCAACTACGACCAGACCAGCGGCGCGCGCACCAGCCACGACAAGCG GCACGTGTGGACGCCGATGGCCAGCGTGCTGGTCAAGCCGCTGCAGGACCTGTCGCTGTACGCCAACTACATCCAGGGCCTCAGCCAGGGCGAGGCGGCG CCGATGACCGCGGCCAACGCCGGCCAGGTGCTGGCACCGTACAAGGCCGAGCAATACGAGATCGGCGCCAAGTACGACCTGGGCGGCTTCACCACCACCC TGGCGCTGTTCGAGATCAGGAAACCGAACGCCTATACCGACGCCAGCAACGTCTTCCGCGCCGACGGCGAGCAACGCAACCGCGGCGTGGAGCTGAGCCT CTATGGCGAACCGCTGGACGGCGTGCGGGTGATGGCCGGCGCCACCTACATCAAGCCCGAGCAGAACAAGACCGGCGACCCTGCCAGCGAAGGCAAGGAC GCGCCCGGCGTGGCCCGCCGCCAGGCCAACCTGGGGGTCAGCTGGGACACCCCGTTCGTCGACGGACTGACCCTCGACAGCCGCTGGATCTACACCGGCT CGGCCTATGTGGACAGCGCCAACGCCCTCGCCGTGCCGCACTGGAACCGCGTCGACCTCGGCGCCGCCTACGCCTTCCAGGTCGCCGGCAAGCCGCTGGT GGCGCGCGCCAACCTGGAGAACGCACTGGGCAAGGACTACTGGACCGCAGCCAACGGCTACCTGTCGATCAGCTCGCCGCGCACCCTTTCCCTTTCCCTC ACGGCGGACTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCCGCCCCACCATAACCAGAAACCGCCGATGACCAGCCAATGACCGCGAAAACCCTGCGCACCTGGTACCTGGTGCACAAATGGACCAGCCTGATCTCC ACGATCTTCCTGCTGATGCTTTGCCTCACCGGGTTGCCGCTGATCTTCCACGAGGAGATCGAGCACTACTTCGAGCCGCATCCGCAGCTCGAGCCGCTCA CCGCCGAGTCGCCGCGCATCGACTACGACGACGTGATCGTCCGCGCCCTGGCCGCCCGGCCGGGCGAAGTGGTGCGCTTCCTGGTATTCGAAAAGGACGA CCCGCTGGGCCTGGTGATCAGCGCGCCGAGCCTGGTACCGCCGCCGGAGAACGGCCACATGCAGCCGTTCGACGCGCGCACCGGGGAATTCTTCGACGCG CTGCCGCCGCCGGGCGGCTTCATGTACCTGATGCTGAAGCTGCACACCGACCTGTTCCTCGGCCTGCCCGGCTACCTGTTCCTCGGCCTGATGGGCCTGC
Amino Acid Sequence
>ligand-gated channel
MPVRTLRPRSLSLAIHAAAMTLALAGAAPALLAAEAPAASSARSYDIAPGPLGRTLSAFASDNGVSLAFDPALTEGRRSAALRGRYAPVEALHRLLLGSG LELQQRSDGSYTLVPAATDGALELQSSLITAQAAGAETLPAEYAGGQVARGARLGMLGNADVMDAPFSITSYTARTIEQQQARSVADLLQANDPSVRVVG GRGDLVDSYTIRGFSVQNADVAFNGLYGLLPFWRVPIEFAERVEVLKGPNALLGGISPGGSVGGTINLVPKRADDQPLTRVSVDWTQRGQLGTHLDIGRR FGENNAFGVRFNGVYRNGDTAVDHQSREFPMLSLGLDFRGERLRLSSDLLYQKESLEGVVRPLLTGPGTTHIPHAPDSKTRFGLRDSYLDQEDYSMVNRG EYDLADNLTAFASIGGRQSNYETIAANSILVGNQGDIVNSLARQRGDRRTYSAEVGLRGNFDTGPLRHDWTLSANRLHERLGMVYAFTGMQPGNLYQTSP HTPLPDFSSLDGSIPKTNETDLGGVALADRLSFLEDRVQVTLGVRRQQIESRNYDQTSGARTSHDKRHVWTPMASVLVKPLQDLSLYANYIQGLSQGEAA PMTAANAGQVLAPYKAEQYEIGAKYDLGGFTTTLALFEIRKPNAYTDASNVFRADGEQRNRGVELSLYGEPLDGVRVMAGATYIKPEQNKTGDPASEGKD APGVARRQANLGVSWDTPFVDGLTLDSRWIYTGSAYVDSANALAVPHWNRVDLGAAYAFQVAGKPLVARANLENALGKDYWTAANGYLSISSPRTLSLSL TADF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site