Strain | Pseudomonas aeruginosa strain AZPAE14840 AZPAE14840_contig_35, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACTTCTCGGGCAACATCACCGACGTCGCGTGCGATATCAACGGCCAGGCGCCGGGTGCGGGCAACGTCACCAACGTCGACCTGGGTATCGTGGCGCCGAC CCATTTCACCGCCGTCGGAACCAACTCCACTTTCCAGGAGTTCGATCTGGTCCTCTCCGGTGCCGGCTGCACCAATGACAAGAAGGTTTCCATCGCCTTC GATCCGGTCACCAACGTCGACCGTATCAGCGGCAACCTGATGCTGATGGGGCCGTCGGAAGCCAAGGGCGTGCAGATCCAGATCTTCAACAATTCGGCGG CCAACACCACGAAGATCCCGCTGGGCTCGGTCGAGGCCGCCCCGCAGAAGGCAACCGTCCTGAAGAACACGGCGACCCTGAAGTACAAGGCCTCCTATGT GTCCACCGAGAAGACCGTGACCGCGGGTACCGGCCTGTCCCATATCCGCTACCTCCTGGCGTACGAGTAAGCGGCGGTCGACGGACGAAGAGGTGAGGCC
|
|
DNA Sequence for Gene |
>NR58_RS29335
ATGGCGCCGCTAATGCATCGTTTTCATTCTTTCGTGGCGGCAAGCGCCGTGGCCATCGCCCTGTGCGTCGGAACGGCTCACGCCGGGCTGATCGCACAGG GCACTCGCGTCGTCTTTCCGGCCAGCGAGCGCGAGGTCACCTTGCGGGTCAGCAATACCTCCGGCACTCCCGTGCTGGCGCAAGCCTGGATCGACGATGG CCGGCAGGACGTTCCCCCCGAGGAACTGCAGGTTCCCTTCAGTGTCACGCCGGCCGTGACGCGAGTGGACCCCAATGGCGGCGCCGTATTGCGCATCGCC TACCTGAAGGCCCCGTTGCCGACGGATCGCGAATCGCTGTTCTGGCTGAATATCCTGGAAGTTCCGCCCAGGGACGAAGACGAAAACAATGCATTGCAGT TTTCCTTTCGTTCGCGCTTCAAACTCTTCTTTCGACCCAGCCAGTTGAAGAGTGTCGATTCGGCTGCCGGGAAACTTCAATGGAAGTTTCTGGAGTCAGG GGGAGCAGGAAAAAAGACCGTAGTACAGGTAAATAATCCGACGCCTTACTACGTTTCGTTCGCCAGCGTCGAATTGATTGTCGATGGCCGTGTCATGTCC GTGGGAAAGGGAATGGTCGCGCCATTCTCGACGAAGGAGTTCGACTGGCACGGAAATCCGAAGAACCTGGAAGCCGCTTCCGTCAGATACGAAGTCATCA ACGATTACGGTGGCCGCAATACCCTCGATAGGGCACTCGGCAAATAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CCCCTCCGTTTCCCCGCTTTCTACTTACGGCCCGACATATGAGTGGCGATTTTAAAATCGCTGCAGGGATTACATATGCCCAAAGTTTCTCTTCATAGGT GCCTGTCCGCTCCCGCTTACGGTGGGCAGGTCGCCCTGTTGCGAATGGCGATACAGGGAGGGGTCGCCGTTCGTTCCCTGCGATTCGCCTGTCTGCTGGC ACTGTTTCCTTCGCTGTCCTCCTGCCAGTCCTGGTCCTCCGTCGGCGCCGCCGGCGTAGCCGGGGCGAAAGCGAAGGAGGCCAGGGCGGGAGCACCGGCG AAACAGCCGCAGGCGCCCGCGGTGGCCGTTGCGTCACCGGCCGGCGGGTTGGACGCACCGTCGCGGCGGATCGTCTTCGACGCGCAGATGCTGGCCCTGG GGCCGGGCGGACGCTCGATCGATACGTCGCGTTTCGAGCGCGGCGACGTCATCGAGCCAGGCCGCTATCGCCTCGACCTGCTGCTCAACAGCCGATGGCG
|
|
Amino Acid Sequence |
>chaperone CupB2
MAPLMHRFHSFVAASAVAIALCVGTAHAGLIAQGTRVVFPASEREVTLRVSNTSGTPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVDPNGGAVLRIA YLKAPLPTDRESLFWLNILEVPPRDEDENNALQFSFRSRFKLFFRPSQLKSVDSAAGKLQWKFLESGGAGKKTVVQVNNPTPYYVSFASVELIVDGRVMS VGKGMVAPFSTKEFDWHGNPKNLEAASVRYEVINDYGGRNTLDRALGK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|