Strain | Pseudomonas aeruginosa strain AZPAE14840 AZPAE14840_contig_16, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAGGAGTTGCGCAATCGCCTGGCCAGCGCGCGCTTCGACCTGGCCAACAGCGAGGTACGGGCGCCGGTCGCCGGCCTGGTGGTCGGCCAGGAAGTGTTCA CCGAGGGCGGCGTGATCGCGCCCGGCCAGCAACTGATGGAAATCCTCCCGGAGCGCCAGCCGCTGCTGGTGGACGCTCGGCTGCCGGTGGAGATGGTCGA CAAGGTCCGCGTCGGCCTGCCGGTGGAGCTGATGTTCAGCGCCTTCAACCAGAGCACTACGCCGCGGGTGGAGGGCGAAGTGACCCTGGTCTCGGCCGAC CGCCTGCTGGACGAGCGCAGCGAGGCGCCGTACTACCGGGTGCGCATCCGCGTAGGCGAGGAGGGCGTACGTCGCCTGGCCGGCCTGGAGATCCGCCCGG GGATGCCGGTGGAGGCCTTCGTTCGCAGCGGCGAGCGCTCGCTGTTGAACTACCTGTTCAAGCCGCTGGCCGACCGTACCCACCTGGCGCTGGGGGAAGA
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DNA Sequence for Gene |
>NR58_RS16695
ATGAATCGCCTGCGAGCCTGCCTGCTGTCCTCCGCGCTGCTTTCGGCCTCTTCGGCCCAGGCGCTGGGCCTGCTGGACGCCTACCAACTGGCGGTGCGCC ACGACCCGACCTTCCAGGCGGCGCTCCACGAGCGCCGCGCTGGCAGCGAAAACCGCGCCATCGGCCGTGCCGGCCTGCTGCCGAGCCTGCGCTACGACTA CAACAAGGCGCGCAACGACTCCACCGTCAGCCAGGGCGACGCCCGCGTCGAGCGCGACTATCGCAGCTACGCCTCGACCCTCAGCCTGGAGCAGCCGCTG TTCGACTACGAGGCCTACGCGCGCTACCGCCAGGGCGAGGCCCAGGCGCTGTTCGCCGACGAACAGTTCCGCGGGCGCAGCCAGGAACTGGCGGTGCGCC TGTTCGCCGCCTACAGCGAAACCCTGTTCGCCCGCGAGCAGGTGGTCCTGGCCGAGGCCCAGCGGCGCGCCCTGGAAACCCAGCTGGCGTTCAACCAGCG TGCCTTCGAGGAAGGCGAGGGCACCCGCACCGACCTGCTGGAGACCCGCGCCCGGCTGAGCCTGACCCGCGCCGAGGAGATCGCCGCCGGCGATCGTGCG GCGGCGGCGCGGCGTACGCTGGAAGCGATGCTCGGGCAGGCACTAGAGGATCGCGAACTGGCCGCGCCCATCGAGCGTTTCCCGGCGTTGCGCCTGCAAC CGGCGACCTTCGAGGGCTGGCGCCAGGTGGCCCTGCAACGCAGCGCCGAGCTGGGCGCCCAGCGCCATGCGTTGGAGGCGGCAGCCTACGAGGTGGAGCG CAATCGTGCCGGCCACCTGCCCAGGCTCAGCCTCTACGCCAGCAGCAGCAAGACGCACTCGGCTTCGGAAAGCACCTACGAGCAGAAATACGACACCGAC AGTGTCGGCCTGCGTCTCAGCCTGCCGCTGTTCGAGGGCGGGCGGGTGTCGGCGGCGACCCGCCAGGCCGGCGACAAGTACGCTCAGGCCCAGGCCGAGC TGGATGCCCAGGTGGCCAGTGTGATCAATGACCTGCACAGCCAGTTCGACCTGACCGCCAGCAGCCTGGCCAAGGTGCGTGCCTACGAGATGGCGGTGGC GGCGGCGCGCGAACAGGTGACAGCGACGCGGCGCAGCGTCGCCGGCGGGGAGCGGGTCAATCGCGACGTGCTGGACGCCGAACAGCAGTTCTACGGCGCC CGCCGCGACCTGGCGGAAGCGCGCTACGCCTACCTCAACGCCTGGCTGCGCCTGCGCCAGCTGGCGGGGGTGCTGGAAGACCGCGACCTGGCGGTGCTGG CTGCCTATTTCGGCGCCGGCGAAGGACGCGCGCAGGTCGCCGCTGCCATCAGATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CTATCGGCCAGCGTGCCTTGCCTTGGGTCATCTCCTGCAACAGTTGCGGCGCGCTGGTGCCGTTTTCGATGGCGATGCCGAAGCGGATGCTCTCGATCAT CCGCTGCAACTGTTCCAGGTCATGCAGTTGCGCCGGTCGGATCAGGCGCTTGGCGGCGACCCCGCGTTCGTTGGAGAGGGTGAGGACGATGCTGCCGTCC GGCCGCTCCAGGCTGAGGTTGACCCGGTACTCGGCCTGGAAGGCCTCGGTGAGGAGCTGGAAAGGGCTGCTGTCGGTCATGGCGGACCACCTGAATGCTG TCGTGCTGGTTGGGACTGGGTGCCGCCCGGAAAGTTCTTTGTCACCGCCGGGCTGTACCCTGCGCCGACGTGCGGACGTCTATCTGCGCACGTGCCTTGG CCTGGGCCTTGCACGCTTCGGGCCAGGTGGCCGTCGTCTTTGTCGGGAGAAGCTATGAAACAGAATTGGGCCGAGCGCCTGCGCGCAAGCATGCACCACC
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Amino Acid Sequence |
>peptidase
MNRLRACLLSSALLSASSAQALGLLDAYQLAVRHDPTFQAALHERRAGSENRAIGRAGLLPSLRYDYNKARNDSTVSQGDARVERDYRSYASTLSLEQPL FDYEAYARYRQGEAQALFADEQFRGRSQELAVRLFAAYSETLFAREQVVLAEAQRRALETQLAFNQRAFEEGEGTRTDLLETRARLSLTRAEEIAAGDRA AAARRTLEAMLGQALEDRELAAPIERFPALRLQPATFEGWRQVALQRSAELGAQRHALEAAAYEVERNRAGHLPRLSLYASSSKTHSASESTYEQKYDTD SVGLRLSLPLFEGGRVSAATRQAGDKYAQAQAELDAQVASVINDLHSQFDLTASSLAKVRAYEMAVAAAREQVTATRRSVAGGERVNRDVLDAEQQFYGA RRDLAEARYAYLNAWLRLRQLAGVLEDRDLAVLAAYFGAGEGRAQVAAAIR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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