Strain | Pseudomonas aeruginosa strain AZPAE14840 AZPAE14840_contig_13, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCAGTCATATCCGTGCTCAGGTGGCGGAGAAACCTGTTCGCCATGGCCTCACGGCGGATGAGCTGATTGGTGTGTTCGAAACCGTGGCGACCTTGCGCA AGCTCTGCTGGGATGCCGCCGAACTCGCAGGGCTCGTTGCCGGGGCTCATTGCTGGTGGGTCGAAGGGCGCGAGGCGGAGGCGCGGCAGTTCCAGGCGCA GATGTCTTTCACCTTGGCGCGAGAAACCTTCTGCCAGGCCGAGCACGACACGATCATGCAGGACGAGCGCCTGTTGCAGGAGCTTGACGAGGCTAGCGAG CGGTCTTTGAAGCAACGTACGTAGCGCGTCGACAAACGAGGGCCGGGCCGGGTTTTACCTACAGGTAAACCCGGCCCGGGTATGTCCGGGGTAACGAAAT ACGACAGTTGAGTTTTTTTTCCGGTTTTTCCTGCTGAGACGTCTTTGTAATTGATAAGTATTCTTAAATATTTATCCATACGAAATATATGGAGAAAAAC
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DNA Sequence for Gene |
>NR58_RS14095
ATGCCAACAGCACATGCGGTTTCCCCTCTGGCAAGGGCTTTAGGAAGTTTGGGGGCAAACAAGATGTCCAGGCTTGGCCTGGCCCTTCTGCTGGCGAGCG CCCAGGCGGTCGCGCAGGAGTACGAATTCAACGTTCCCGCCCAGCGGCTCGACGCGGCGCTTCAGGCGCTTGGCCGCCAGGCGGGTCTGCAGGTGCTCTA CAACCCGAGCGACCTGAGTGGTCTGCGTAGCCGCAGTGTCAGCGGCAAACTCGAATTGGAACAGGCGATCAGCCAACTGCTGGATGGGGCCAACGGTATC GGTTTCGAACTGCAGGGCAAAACCTTGATCCTACGCCTGCAGGACTCCTCTTCGGTGATATCCCTGGATTCAATGGTGGTCTCAGGCCTGGCGCTGAATC CCACTACTGAAAACAGCGGCTCCTATGCCTCGCCTGCGGTGTCGATCGGCAAGGGCAACAAGAGCATCAAGGAAATTCCCCAATCGGTGACGGTGGTCAC CCAGAAGCGGATGCAGGACCAGAACATGTCCACCGTATCCGATGTCCTGGCCAACGCGCCGGGCGTTACCTCCATCCCGATGTTCGGTACCGGCGAGCAG TACTACTCTCGCGGTTTCTTCATCGAAAACTTCCAGTACGACGGTGTACCCCTGGAGCGCCAATCCTATGCCCGTGGTTCGGACTTCACCGGGCAGACCG CGATCTTCGATCGGGTAGAGATTCTCCGGGGTGCGCAAGGTCTGCTGGAGGGCGGCGGCAATCCCTCGGGCTCGGTCAACTTCGTGCGCAAGCGACCGAC GGCGGAGAACCAGGTCCGGCTGACTGCCAAGGCCGGCTCCTGGGATCACTATGGTACCCAGGCCGATATCTCCGGCCCGATCGACGAACAGGGAAGACTG CGAGGGCGCCTAGTTCTCGACTACGACACCAAGAACTCGTTCGTCGACCACGTAGGCGATGACCGCCAGACCATCTATGCCGCGCTCGATTACGATCTTA CGGAAGCTACACGCCTCGGCTTCGGCTTCAGTCGCGAGCGGATCGACGCCAACATCGATGTCAACGGCTTGCCCAACTATACCGATGGTTCGATGCCGCA TTTCAGTCGCTCGACTTTCCTCGGCGGCGACTGGTCCTACTGGGACAAGATCCAAGAGACCTTCTACTTCGATATTGCCCACCAGTTCAACGAAGACTGG TCGTTGAATGCCACGGTGGTCAATGCGCGCGAGAAGAACGACTACAAGTACCTGCTGATGGCCGGCAGCATCAATCCGGACAATACCAGTACGCTGCGGG GAGATGCCTACGTCTTCGACTTCTTTTCCGAGCACTGGGGCGGGGATGTCTATGTCAATGGTCGTACCAAGGTTGCCGATCGCCAGCTGAACCTTACATT CGGGGCGAACTATTCGGACCTGGACAGCAGCGATACCTTCGGCTGGAGGCAGCGCTACGTACCCAACTGGGATATCTTCAACTCGCCGGTCAATACCAAC AAACCATCCGATGACGACATCTATTCCGTCAGGCGCAGCGACGATGGCTACGCTTCGATCCAGAAAGGCGTCTACGGCATGGGGCAATACTATCTGACCG ACGACCTGTCCGTAGTGCTCGGGACTCGCATTTCGTCCTACCAGAAGGCTTATACCTCCAATGGGCCTTGGGGTTATTCGAAGGCGGTGGCCAAGGAGTC GGCGAAGGCCATTCCCTATGCCGGCATCATCTACGACCTCAATCCGGAGTGGAGTGCGTATGCCAGCTTCACCAAGATCTTCCTTCCGCAGTCGGTGCGT ACCGCGAGCGGCAGCATCCTGGGACCGAAAAGCGGGAAAAGCGTCGAGACCGGTCTGAAAGGCATCCTCAACGATGGCCGCTTGAATGCCACCTTCGCGC TGTTCCGCATGGAACAGGACAACATCCCGATCCAGGACGCCAACCTGCCCGATGACGTTCAGGAAGCCAACTGCGGCGGTACCTGCTACCACGGCGGCGG CAAGGCTATCAGCCGCGGCTTCGAGACCGAGCTCAGCGGCGAGTTGTTCGACAACGTGCAGGTATATGCCGCCTACACCCTCAACCTGCTGCGTTACCAG GGCGAGGTGCCCAGCGAAGCGGATGACGTTGGCGCCAGCGTCAATACACCGAAGCACATATTCCGCTCCTGGGTCGACTACCGGTTGCCGGGCAATTGGT CGCGGGTATCCGTCGGCGGCGGCGTCAATGCACAGAGCCGGTCGGCCGGGTTCGGCTACTACGGACGGGAGCAGAGCGGCTTCGCGGTATGGAACAGTCG CCTGGCCTATCGCTTCACCGAAGAGCTGACCGGTGCGATGAACGTCAACAACATTTTCGACAGGCGCTACTTCAAGTCCGTCGACTATGGCCACAACTAC TTCGGCGATCCGCGCAACGTGCTGTTCACGCTTACCTATAGCTACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCTGCTGACGGCCGGTCATCGGGCCTGCCGGAACGGGAACTGTACGAATGCCGGCCTTCGGGCCGGCTTTTTTCTATCCGTTCGGAATCCGGGTGACGGC CAGCAGGGTTGTTGGCGATTCTCGTCGGCTGGTCCGTGACGAGCACGACGGTGCGTCATTGCCGGCAGTGCAGGCACAAAGATAGAGGCGCGCAGCTAAT GTTGGGCGACTGGGCGGCGGCGATGTCTTCAGCACGCTTCGCAGTAGAAGAGAGGGAGTCGAGAGACGCAGAGACGGGCTGGCTGAGCGGGCGATACGAC GTGTGGAAAGGCGGTTTGTCGGGGTGAGCTTCGCTGCTGCCTCACCGCGAGGCGGGAAGGGCGGACGGGACGCCATGGTGTCCCGTCAGGCTGATGTCTA TCAGGCGGGGTGCAGCGCGGGTTCCACAATCTGGCCGGCGTGCATATGTACCAATTTGTCGGCGATGTCGAAGTAACGGTCGTCGTGGGATATGACGATG
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Amino Acid Sequence |
>hypothetical protein
MPTAHAVSPLARALGSLGANKMSRLGLALLLASAQAVAQEYEFNVPAQRLDAALQALGRQAGLQVLYNPSDLSGLRSRSVSGKLELEQAISQLLDGANGI GFELQGKTLILRLQDSSSVISLDSMVVSGLALNPTTENSGSYASPAVSIGKGNKSIKEIPQSVTVVTQKRMQDQNMSTVSDVLANAPGVTSIPMFGTGEQ YYSRGFFIENFQYDGVPLERQSYARGSDFTGQTAIFDRVEILRGAQGLLEGGGNPSGSVNFVRKRPTAENQVRLTAKAGSWDHYGTQADISGPIDEQGRL RGRLVLDYDTKNSFVDHVGDDRQTIYAALDYDLTEATRLGFGFSRERIDANIDVNGLPNYTDGSMPHFSRSTFLGGDWSYWDKIQETFYFDIAHQFNEDW SLNATVVNAREKNDYKYLLMAGSINPDNTSTLRGDAYVFDFFSEHWGGDVYVNGRTKVADRQLNLTFGANYSDLDSSDTFGWRQRYVPNWDIFNSPVNTN KPSDDDIYSVRRSDDGYASIQKGVYGMGQYYLTDDLSVVLGTRISSYQKAYTSNGPWGYSKAVAKESAKAIPYAGIIYDLNPEWSAYASFTKIFLPQSVR TASGSILGPKSGKSVETGLKGILNDGRLNATFALFRMEQDNIPIQDANLPDDVQEANCGGTCYHGGGKAISRGFETELSGELFDNVQVYAAYTLNLLRYQ GEVPSEADDVGASVNTPKHIFRSWVDYRLPGNWSRVSVGGGVNAQSRSAGFGYYGREQSGFAVWNSRLAYRFTEELTGAMNVNNIFDRRYFKSVDYGHNY FGDPRNVLFTLTYSY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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