Pseudomonas aeruginosa AZPAE14840, NR58_RS13970

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14840 AZPAE14840_contig_13, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCTCCGCCCACAACATCGCCATCACCAACCACGAAGTAGCGGCCTGGCTTGCCGGACAGCCGCTACCCCACCGCCTCAGCGATGCCCAGCAGAACCATGC GCGGCTTGCGACCATAGTTGCCCTTAAGGACGTTTCGCCGCCTTCGGCTGGCTGTTCCGCCCATGTGAGATGGAATCCCACAGCGACCAACCCGCTGAAC CGGATACGTCCTCCGGCAATCGGCCTGGCTCATGAGCTGCTGCATGCCTACTACAGTTGCCGAGGCGCACAACCCGGCTACGACGACAACCACTACTCCA CGGTACTGTTCGAATACCGCTGCGTCGGCCTCGGCCCCTGGGACGAAGCACCATTGTCGGAAAATGCCCTACGCAAGGAATGGTGGAGCTATGCCTGCCA GCAGGTGCCCGGAAGCGACCCAGAGAACAGGAAGGCCATCGGCAAACGCATCAGTTACATGTAGTCGTCGCCGCTGTCCCGACAGAAACGAGGGACCCAG
DNA Sequence for Gene
>NR58_RS13970
ATGCCCCGTCCCACCGATAGCACTACCAGCCTCTCCCTGACCGCCTCGGCGCTGGCAGCCCTGTTCCCGGAGCGTCTGGCCGGGGAAGAACGCCTGAACG CACTGCCCGGTTGGGAACTGCTGGGCTACAGCGCCAGCCCCTTAGCCCTGGACGGCGCAATCGCCACCCATCTCACCGCCACCCTGCACAACGACGCCGA CCAGCGTCCGCTCGACGGCCTGGTCGCGGAGATCCGCCAACTCCCCGGCGATGCCAGCGCCGAGCGCTACCAGGTGCTGTTGCGCCCCTGGCTCTGGTGG CTGACGCTGGCCAGCAACAACCGGGTGTTCCAGAACCTGGCCACCAGCGACATCGTCACCCAGGTCTTCGACCAGCACGGCTTCAGCGACTACCAGTTGC AGCTCAGCGGCAGCTACCAGCCCCGCGAATACTGCGTGCAGTACGGAGAGAGCGATCTCGCCTTCGTTTCGCGGCTGCTGGAGGAAGACGGCATCTTCTG GTTCTTCACCCATGCCGCCGGCAAGCACACCCTGGTGCTGGCCGACAGCAACGACGCCTTCCCGCCGATTCCCAACGGCCCGCAAGTGGCCTACCTGGGC CAAGGAATCGGCGTGCGCGAGTTGCAGGGCGTGCGTTCGGCGCAGTACAGCCTCCAGGCGGTATCCGGGACCTACAGCGCCACCGACTACGAGTTCACCA CCCCGGGCACCTCGCTGTACTCCCAGGCCGAGGCGGTTTCCGGCGCCGCCGGCGTCTACCAGCACCCCGGCGGCTACACCGCCAAGGCCCAGGGCGACAG CCTGACCAAGCAACGCATCGACGGCCTGCGCAGCCAGGAGACGCGCCTGATCGGCGAGAGCGACTGCCGCTGGCTGGTGCCCGGCCACTGGTTCACCCTC AGCGGGCATGACGACGATTCGCTGAATATCGACTGGGTGCTGACCTCGGTCACCCATGACGCCAGTCACCCGCACTACCGCAACCGCTTCGAGGCGATCC CCAAGGCCACCGCCTACCGCCCCGCGCGGGTCACGCCCAAGCCGCGCATGCACACCCAGACCGCCCTGGTGGTGGGCAAGGCCGGCGAGGAGATCTGGAC CGACCAGTACGGCCGGATCAAGATCCAGTTCCCCTGGGACCGCGACGGCAAGAACGACGAGACCTCCTCCTGCTGGGTGCGCGTGGTGCTGCCCTGGAGC GGCAAGGGCTTCGGCATGCAGTTCGTGCCGCGCATCGGCCAGGAAGTGATCGTCACCTTCATCGACGGCGACCCGGACCGCCCGCTGGTCACCGGCTGCG TCTACAACGGCGACAACGCCCTGCCCTACGCGCTGCCGGACAACCAGACGCAGTCCGGGATCAAGACCAACTCGTCGAAGGGCGGCGGCGGTTTCAACGA GCTGCGCTTCGAGGACAAGAAGGACGCCGAGGAAGTCTTCCTCCAGGCGCAGAAGGACCTCAACGTCAACGTGCTCAACGACAGCACCGCCAGCATCGGC CACGACGAGACCCTGACGGTGCAGAACGCCCGCACCCGCACGGTGAAGGAAGGCGACGAGACCGTCACCCTGGAGAAAGGCAAGCGCACGGTGACCATCC AGACCGGCAGCGACAGTCTGGATGTGAAGGACACGCGCACGGTGACGGTGGGCGCCGACCAGACCCACAGCACCGGCGGCAACTACAGCCACAAGGTCAG CGGCAACTTCGAGCTGACGGTGGACGGCAACCTGACCATCAAGGTCAGCGGCACCCTCGCCCTGCAGAGCGGCGGCAGCCTGACCCTGAAGAGCGACGCC GACCTCGCCGCCCAGGCTGGCACCTCGCTGACCAGCAAGGCCGGGACGTCGCTGACCAACCAGGCCGGCACCTCCCTCACCAACAAGGCCGGCACCAGCC TGACCAACGATGCCGGCGTCAGCCTGACCAACAAGGCCGGCGCCGAACAGACGGTGGACGGCGGCGGCATGCTGACCATCAAGGGCGGCCTGGTAAAGGT CAACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAGAAGCGCATGGCGGCATCCGGCAAGCTCGACCTGGTTCGTGGCGACAGCCATCTCGCCGGCAACCTGCTCGACGGCAGCCTGGAAGGCCCGTTGCGC ATCGACGAGCACGACAGGCCGCAGGCCAGCCTCGGCTACCGGCAGGGCCAGTTGCACGGCGCCAGCACCCTGTTCCATCCCAACGGCAAGGTCTCCGCGC AACTCGCCTTCGTCGACGGCAAGCTGCACGGGCCGGCGAGTTTCCATGCCGCGGAAGGCTGGTTGCAGCGCAAGGCGCACTACCGCAACGGGCTGCTCCA CGGCGAAGCGCTCAACTATTTCGCCAACGGCCAGGTGGCCGAGCGCGAGCATTACCGCGACGGCGTACGCGACGGGGTCTACCAACGCTTCCATGGCAAT GGCCAACTGGCCTTCGACGGACGCTACCTGAACGGCCAGCTACTGGACGGCGCCCAGCCGTTCGCCGACGACGGCCGGCCGCTGGACAGCGAGGGCAAGC
Amino Acid Sequence
>type IV secretion protein Rhs
MPRPTDSTTSLSLTASALAALFPERLAGEERLNALPGWELLGYSASPLALDGAIATHLTATLHNDADQRPLDGLVAEIRQLPGDASAERYQVLLRPWLWW LTLASNNRVFQNLATSDIVTQVFDQHGFSDYQLQLSGSYQPREYCVQYGESDLAFVSRLLEEDGIFWFFTHAAGKHTLVLADSNDAFPPIPNGPQVAYLG QGIGVRELQGVRSAQYSLQAVSGTYSATDYEFTTPGTSLYSQAEAVSGAAGVYQHPGGYTAKAQGDSLTKQRIDGLRSQETRLIGESDCRWLVPGHWFTL SGHDDDSLNIDWVLTSVTHDASHPHYRNRFEAIPKATAYRPARVTPKPRMHTQTALVVGKAGEEIWTDQYGRIKIQFPWDRDGKNDETSSCWVRVVLPWS GKGFGMQFVPRIGQEVIVTFIDGDPDRPLVTGCVYNGDNALPYALPDNQTQSGIKTNSSKGGGGFNELRFEDKKDAEEVFLQAQKDLNVNVLNDSTASIG HDETLTVQNARTRTVKEGDETVTLEKGKRTVTIQTGSDSLDVKDTRTVTVGADQTHSTGGNYSHKVSGNFELTVDGNLTIKVSGTLALQSGGSLTLKSDA DLAAQAGTSLTSKAGTSLTNQAGTSLTNKAGTSLTNDAGVSLTNKAGAEQTVDGGGMLTIKGGLVKVN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site