Pseudomonas aeruginosa AZPAE14840, NR58_RS13125 (fmt)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14840 AZPAE14840_contig_10, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGGAGGTGGTCGACGACGCGGTGCGCCAACTGATCGACGACATGTTCGAAACCATGTACGAAGCCCCGGGCATCGGCCTCGCCGCGACCCAGGTGAACGT GCACAAGCGCATCGTGGTCATGGACCTCAGCGAAGACAAGTCCGAGCCGAGGGTATTCATCAACCCCGAGTTCGAACCGCTGACCGAGGATATGGACCAG TACCAGGAAGGCTGCCTGTCGGTACCCGGCTTCTACGAGAACGTGGACCGACCGCAGAAGGTCCGGATCAAGGCCCTCGACCGCGATGGCAACCCCTTCG AGGAAGTCGCCGAAGGCCTGCTGGCGGTATGCATCCAGCACGAATGCGACCACCTCAACGGCAAGCTGTTCGTCGACTACCTGTCCACCCTCAAGCGCGA CCGCATCCGCAAGAAGCTGGAAAAGCAGCATCGACAGCAGGCGTGACCCCATCCCCCAAAGGCTTGCCCCGGCAAGCCTTTTTCTTTTAGCGAGCCCCGC
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| DNA Sequence for Gene |
>NR58_RS13125
|fmt
ATGAGCCAAGCATTGCGCATCGTCTTCGCCGGAACCCCGGAATTCGCCGCCGAGCATCTCAAGGCCCTGCTCGACACCCCACATCGGATCGTCGCCGTCT ACACCCAGCCTGACCGGCCGGCCGGCCGCGGGCAGAAACTGATGCCCAGCGCGGTGAAGAGCCTGGCCCTGGAGCATGGCCTGCCGGTCATGCAGCCGCA GAGCCTGCGTAATGCCGAGGCCCAGGCGGAGCTGGCGGCCCTGCGCGCGGACCTGATGGTGGTGGTCGCCTATGGCCTGATCCTGCCCCAGGCGGTACTC GATATCCCGCGCCTGGGCTGCATCAACAGCCACGCCTCGCTGCTGCCGCGCTGGCGCGGCGCCGCGCCGATCCAGCGCGCGGTGGAAGCCGGCGACGCGG AGAGCGGCGTCACCGTGATGCAGATGGAAGCAGGGCTCGACACCGGCCCGATGCTGCTCAAGGTGAGCACGCCGATTTCCGCCGCGGACACCGGCGGCAG CCTGCACGATCGGCTCGCCGCGCTCGGCCCGAAAGCGGTGGTCGAAGCCATCGCCGGCCTGGCCGCCGGCACCCTGCATGGCGAGATCCAGGACGACGCC CTGGCCACCTACGCGCACAAGCTGAACAAGGACGAGGCACGCCTCGACTGGAGCCGTCCGGCCGTCGAACTGGAGCGCCAGGTCCGCGCCTTCACCCCCT GGCCGGTCTGCCACACCAGCCTCGCCGATGCTCCGCTGAAAGTCCTCGGCGCCAGCCTGGGGCAGGGCAGCGGGGCGCCCGGAACCATCCTCGAGGCCAG CCGCGACGGCCTGCTGGTCGCCTGCGGCGAAGGCGCCCTGCGCCTGACCCGCCTGCAATTGCCTGGCGGCAAGCCACTGGCCTTCGCCGACCTCTACAAC AGCCGCCGCGAGCAATTCGCCGCCGGCCAGGTGCTCGGCCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCCGCGTCTCGCCGCCTGCCAGGCGCTGGCCGCGGTGCTCGCCGGACGCGCCTCGCTGTCTGGCGCGTTGCCGCCGCAACTGGACAAGGTCGCCCCGCG CGATCGCGGCCTGACCCAGGAGCTGGCCTTCGGCGCGGCGCGCTGGCAACCGCGCCTGCAGGCCCTGGCCGCGCGCCTGTTGCAGAAGCCGTTCAAGGCC GCCGACACCGATATCCACGCCCTGCTGCTGATCGGCCTCTACCAGTTGCTCTACACGCGGATTCCGCCGCACGCCGCGATCGGCGAGACCGTCGGCTGCG CCGACAAGCTGAAGAAGGGCTGGGCCAAGGGCGTGCTCAACGCCGTGCTGCGCCGCGCGCAGCGCGAAGGCGAGACGCTGCTGGCCGAGGTCGACCGCGA TCCCTCGGCGCGCCTGGGACATCCGCGCTGGCTGCTGAAAGCGCTCAAGCAGGCCTGGCCGGAGCAACTCGACGCGCTCTGCGCAGCGAATAACGCACAC
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| Amino Acid Sequence |
>methionyl-tRNA formyltransferase
MSQALRIVFAGTPEFAAEHLKALLDTPHRIVAVYTQPDRPAGRGQKLMPSAVKSLALEHGLPVMQPQSLRNAEAQAELAALRADLMVVVAYGLILPQAVL DIPRLGCINSHASLLPRWRGAAPIQRAVEAGDAESGVTVMQMEAGLDTGPMLLKVSTPISAADTGGSLHDRLAALGPKAVVEAIAGLAAGTLHGEIQDDA LATYAHKLNKDEARLDWSRPAVELERQVRAFTPWPVCHTSLADAPLKVLGASLGQGSGAPGTILEASRDGLLVACGEGALRLTRLQLPGGKPLAFADLYN SRREQFAAGQVLGQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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