Strain | Pseudomonas aeruginosa strain AZPAE14840 AZPAE14840_contig_1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAAGGACGGCGCGCGCGGGCTCCTGGCGATCCGCCAGGCCGGCGGCTACACCCTGGCCCAGGACGAGGCTACCTGCGTGGTCTACGGCATGCCCCGCGAA GCGGTGGAACTGGGCGCCGCGGAAGACGTGCTGCCGCTCGAACGGATCGCCGCCGCGCTGCTCCAGCAAGCCGCCCGGCGCGGCAGCGGCAACCGCCTCT GAGCGGGATTCTGGCCGGCCCGCTGCGCTTTTTCGCCGCCCCCCGCAACCTCCCCCGCCGAGACCCCGCCGACGACAGGCCCGAACCACGGGCCTTTGCC TGCTCGCCATCATTGTGACGTCAAATTAATGGCGAAATAAAACCAAATTACGTTGCCTGAAATAATGCACATCTGCACAATTGGCCCTTTCGCCAAAAGT TCGACACACGCTTTCGATCCATGATTTCGGCCGCGGGCCGGGCGAGAAACTGATAGGGATAGCCATGGCGGCGAACTGGGGGTTGCGCGGCAAATCGGTG
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DNA Sequence for Gene |
>NR58_RS00675
GTGGCGCTGTTGCTGGCCTGTGCCCTGGCACTGGTCCCGGCGGTGCTGCTGGGCTGGCGCGCGATGGACGACATCCGTACGCACTTCGGCCTGGCCTACG CGAAGAACTTCACCCTGCTGCACCGGCAGAAGATCCTCGCCCCGGTCTCCCGCGAACTGGCGTTGTCGCGCCGTTTCGCCGAATCGGTGGTGACCCGCGA CTGGCTGCTGAAGGAAGACGACCCGGCGCGCCGCGCGCTGTTCTTCCGCGAGGCCGAGGGCTACCGCGGCGACTTCCGCGACCACGCCTACTTCATCATC GCCAGCGGCTCCCAGCACTACTACTTCAACGACGGCCGCCAACCCTACAGCGAACGGCCGCGCTACACCCTGGAGGCCGGCGACCCGGAAGACGCCTGGT ACTTCAATACCCTGCGCAACAGCGCCGCCTACAACATCAACGTCAATGTCGACAGCAAGCTGAACCTGACCAAGGTCTGGTTCAACCTGGTGATCCGCGA CCAGGGCCGGCCCATCGGCCTGGCCGGCAGCGGCCTGGACCTGAGCGGCTTCCTCGACGACTTCATCATCGCCCGCGAGCCGGGCGTGACGCCGATGATC GTCGGCGACGACGGCGCCATCCAGGCCCACCCGGACCGCCGCCTGATCGCCTACAGCTCCGCCGCCGGCGGCGCCAGCGAACGCCACCGGGTGTTCGACC TGCTCGACCAGCCGGAACAGCGCGACGCCCTGCGCGAGGCCATGCGCCTGGCCCGCGCCAAGGCCGGCTCGGTGCACTGCCTGTGGGCCGGCCTCGACGG CCGCCAGCAACTCTTCGCCGTGGCCTACATTCCCCAACTGCGCTGGTACGTGCTCACCGCCGTCGACCTGCACGCCGCCCAGGTCCTCGACAACCGCTGG CTTTGGCCGCTGGCGGGCACGTTCCTGCTGTTGCTGGTGGCCCTGCTGCTGGGCTTCGCCTATGCCGTCGAGCGCCTGCTGTTGCGCCCCCTGCGCAGCC TCAAGCGCTCGGCCAAGGCGATCGCCGCCGGGCGCTACGACACGCCGCTGCCGCTGGCGCGCCAGGACGAGATCGGCTCGCTGTCGAAGGCCTTCGCCAG CATGGCCGACCAGGTCCGCCGGCACACCGCCGAGCTGGAAGACAAGGTCCAGGAGCGCACCCAGGCGCTGGAGGAAGCCAACCGCGAGATGGCCGCCGCG CAGAAGAAGATCGGCGACAGCCTCGACTATGCCAGCCTGATCCAGCGCGCGATCCTCCCCGACCGCCAGCTCAGCGCCACCCTCGGCGAGCATCACTTCA TCCTGTGGAAACCGCGCGACGTGGTCGGCGGCGACTTCTACGTGTACCGCGAGCAGACCGACGGCTACCTGATCGGCGTGGTCGACTGCGCCGGTCACGG CGTGCCCGGCGCGCTGATGACCATGCTCGCCCGCGCCGCCATCGACCACGCCATCGAGGCGGTGGGCAGCCGCGACCCGGCGGCGATCCTCGGCGAGACC GACCAGGCGATGCGCAGCATGCTCAGCCAGGAGCAGATCCCCCAGGCGCTGGCCACCAACATGGATGCCGGGCTGGTCTGGGTCGACCGCCGGCGCCGCC AGTTGGCCTTCGCCGGGGCGAAGATCTCGCTGTACGCCAGCGACGGCGAGGAGGTCCAGGAACTCAAGGGCGCGCGCCGGGCGATCGGCGACAAGCGCCG TGGCGACTACCGCAACATCGAGGTACCGCTGGCGCCGGGCTGGACCTTCTACCTGAGCACCGACGGTTTCCTCGACCAGGCCGGCGGCGAACACGGCTTC GGCTTCGGCAGCCGGCGCTTCGCCGACATGCTCCGCGACCACGCGCGGCAGCCGCTCCCCGAGCAGGCCGAGGCCTTCGTGGCGACGCTCGCCGAGTACC AGGGCGAGCACCCGCAACGCGACGACATCACCATCCTGTCCTTCCGATTCGACTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGGCACCCATGGAAACGCTAGACCTGCTGGCCATGCGTGAAAGCTACACCCGCCAACGCATCCTGCTCTGCTTCAACGGACCGATCTCGCGCAGCCTGAT CGAGGAGATAGGCCACGCGCTGCGCAACTACCTGCACGCCGAACAGGCCAAGCCGAGCGAAGCGATGGACGTCTTCGCGGTGTACATCGAGATGACCCAG AACATCCGCCACTACGCCAATCTCAAGGGCTACGGCGAACACGAGGCGGCGGCCACGGTAGCCATCGCCCGCAACGAGGACGGCCACTACGTGGTGTCCG CCGGCAACCTGGTGGAACGCGACGACGGCCAGAGCCTGGTGCGCAGCATCCAGGCCATCGCCAACCTCGACAAGGCCGCCCTCAAGGCCGCCTACAAGGA GCAGCTACGCCGCCCGCGCGACAGCGGCTGCGCCAGCGGAGCCGGTCTCGGCCTGCTGGACATCGCCCGCAAGTCCAGCGAACCACTGGCCGCATCGCTG
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Amino Acid Sequence |
>histidine kinase
MALLLACALALVPAVLLGWRAMDDIRTHFGLAYAKNFTLLHRQKILAPVSRELALSRRFAESVVTRDWLLKEDDPARRALFFREAEGYRGDFRDHAYFII ASGSQHYYFNDGRQPYSERPRYTLEAGDPEDAWYFNTLRNSAAYNINVNVDSKLNLTKVWFNLVIRDQGRPIGLAGSGLDLSGFLDDFIIAREPGVTPMI VGDDGAIQAHPDRRLIAYSSAAGGASERHRVFDLLDQPEQRDALREAMRLARAKAGSVHCLWAGLDGRQQLFAVAYIPQLRWYVLTAVDLHAAQVLDNRW LWPLAGTFLLLLVALLLGFAYAVERLLLRPLRSLKRSAKAIAAGRYDTPLPLARQDEIGSLSKAFASMADQVRRHTAELEDKVQERTQALEEANREMAAA QKKIGDSLDYASLIQRAILPDRQLSATLGEHHFILWKPRDVVGGDFYVYREQTDGYLIGVVDCAGHGVPGALMTMLARAAIDHAIEAVGSRDPAAILGET DQAMRSMLSQEQIPQALATNMDAGLVWVDRRRRQLAFAGAKISLYASDGEEVQELKGARRAIGDKRRGDYRNIEVPLAPGWTFYLSTDGFLDQAGGEHGF GFGSRRFADMLRDHARQPLPEQAEAFVATLAEYQGEHPQRDDITILSFRFD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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