Pseudomonas aeruginosa AZPAE14840, NR58_RS00265

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14840 AZPAE14840_contig_1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCTGCTCACCACCAACGCCGGCACCGAGATGATCGCCAGCCTCTGCGCCGATCCGGAACTGATGCCCGAGCCGGAAGCCATCGCCAAGTCGCTGCGCGAA CCGCTGCTGAAGATCTTCCCGCCGGCGCTGCTCGGCCGCCTGGTGACCATCCCCTACTACCCGCTCAGCGACGACATGCTCAAGGCCATTTCGCGCCTGC AACTGGGGCGGATCAAGAAGCGCGTGGAGGCGACCCACAAGGTGCCGTTCGAGTTCGACGAGGGCGTCGTCGACCTGATCGTCTCGCGCTGCACCGAGAC CGAGAGCGGTGGCCGGATGATCGACGCGATCCTCACCAACACGCTGTTGCCGGACATGAGCCGCGAGTTCCTCACCCGCATGCTCGAAGGCAAGCCGTTG GCCGGGGTACGCATCAGTAGCCGCGACAACCAGTTCCACTACGACTTCGCCGAGGCCGAGTGACAACCAGCGACACGTAGAGCAGTAGAAGGAACCGTCG
DNA Sequence for Gene
>NR58_RS00265
ATGGGATTGATGCAACTGACCCGCCTGGTCCAGGTGGATTGCCCGCTGGGGCCGGACGTGCTGCTGTTGCAGCGCATGGAGGGACGCGAGGAACTGGGAC GGCTGTTCGCCTACGAGCTGCACCTGGTATCGGAAAATCCCAACCTGCCGCTGGAGCAGTTGCTCGGCAAGCCGATGAGCCTGTCCCTGGAGCTGCCCGG CGGCAGCCGGCGCTTCTTCCACGGCATCGTCGCGCGTTGCAGCCAGGTGGCCGGGCACGGCCAGTTCGCCGGCTACCAGGCCACCCTGCGGCCCTGGCCG TGGCTGCTGACGCGTACCTCGGACTGCCGCATCTTCCAGAACCAGAGCGTGCCGGAGATCATCAAGCAGGTGTTCCGCGACCTCGGCTTTTCCGATTTCG AGGATGCCCTCACGCGCCCCTACCGCGAGTGGGAATACTGCGTGCAGTACCGCGAGACCAGCTTCGACTTCATCAGCCGGCTGATGGAACAGGAAGGCAT CTACTACTGGTTCCGCCATGAGCAGAAGCGCCACATCCTGGTGCTCTCCGACGCCTACGGCGCGCATCGCAGCCCGGGTGGCTACGCCAGCGTGCCGTAC TACCCGCCGACCCTCGGCCATCGCGAGCGCGACCACTTCTTCGACTGGCAGATGGCACGCGAGGTCCAGCCCGGTTCGCTGACCCTCAACGACTACGACT TCCAGCGCCCCGGCGCGCGCCTGGAGGTGCGTTCGAACATCGCCCGGCCGCACGCGGCGGCCGACTACCCGCTGTACGACTATCCCGGCGAATACGTGCA GAGCCAGGACGGCGAGCAGTACGCGCGCAACCGCATCGAGGCGATCCAGGCGCAGCACGAGCGCGTGCGCCTGCGCGGCGTGGTGCGCGGGATCGGCGCC GGGCACCTGTTCCGCCTGAGCGGCTATCCGCGCGATGACCAGAACCGCGAGTACCTGGTGGTCGGCGCCGAATACCGGGTGGTCCAGGAACTCTACGAAA CCGGCAGCGGCGGCGCCGGCTCGCAGTTCGAGAGCGAGCTGGACTGCATCGACGCCAGCCAGTCGTTCCGTCTCCTGCCGCAGACTCCGGTACCGGTGGT GCGGGGTCCGCAGACTGCGGTGGTGGTCGGGCCCAAGGGCGAGGAGATCTGGACCGACCAGTACGGCCGGGTCAAGGTGCACTTCCACTGGGATCGCCAC GACCAGTCGAACGAGAACAGCTCCTGCTGGATTCGCGTGTCCCAGGCCTGGGCCGGGAAGAACTGGGGTTCGATGCAGATCCCGCGGATCGGCCAGGAAG TGATCGTCAGCTTCCTCGAAGGCGACCCGGACCGGCCGATCATCACCGGGCGGGTCTACAACGCCGAGCAGACGGTGCCCTACGAGCTGCCGGCGAACGC CACCCAGAGCGGGATGAAGAGCCGTTCGAGCAAGGGCGGCACGCCGGCCAACTTCAACGAGATCCGCATGGAGGACAAGAAGGGCGCCGAGCAGTTATAC ATCCACGCCGAGCGCAACCAGGACAACCTGGTCGAGAACGATGCCTCGCTGTCGGTCGGCCACGACCGCAACAAGAGCATCGGCCACGACGAGCTGGCGC GCATCGGCAACAACCGCACCCGCGCGGTGAAGCTCAACGACACCCTGTTGGTGGGCGGGGCGAAGAGCGACAGCGTCACCGGCACCTACCTGATCGAGGC CGGCGCGCAGATCCGCCTGGTCTGCGGCAAGAGCGTGGTGGAGTTCAACGCCGACGGCACCATCAATATCTCCGGCAGCGCCTTCAACCTCTACGCCAGC GGCAACGGCAACATCGACACCGGCGGCCGCCTCGACCTCAATTCCGGCGGCGCCAGCGAGGTCGACGCCAAGGGCAAGGGCGTGCAGGGCACCATCGACG GCCAGGTACAGGCGATGTTTCCGCCGCCGGCGAAGGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCGGCGGCATCCTGGCCGCCCGCCCTCGGGCAGGACGCCGCGGGAGCCTTGACGATTCGCGCATGTCCTCGCCAGGCAGAAGCGGCGGTCGCTCAAGAC CGATGGTGTTGCGCTCAGGGTAGGTCGACCTTCAGGCCGCGGCCAGTGCGTATGCCGACGTAGAATGCGTCCTTGAGGGCCCTGGCGAGTTCCGGGTCGG TCTCCTCGAACTCTTTCCCGGCGATGCCGCCGAAGCTCAGCCGGTGCAACGCGGAACGGTCCAGGCTGCGGTCGAGCAGCACGGCTTTCAGGTACAGCAA CTGCTTTTCCACGGAGAGCAGCATCCCGCATTGCGGATGCCGGGCCAGCCGCTCGGCGACCAGCGCCAGGGCGCGTTCGACATAGTTCACGGGGGACATG GCTGCGCCGCTTCAGCCCTTGGGAAAGCCCGTCTCGTACTCCTCGCGGGTGATTTCCCGGCCGAAACGCAGCGCATCGTTGAACAGGCGGTTGTCGTGCT
Amino Acid Sequence
>type VI secretion protein ImpA
MGLMQLTRLVQVDCPLGPDVLLLQRMEGREELGRLFAYELHLVSENPNLPLEQLLGKPMSLSLELPGGSRRFFHGIVARCSQVAGHGQFAGYQATLRPWP WLLTRTSDCRIFQNQSVPEIIKQVFRDLGFSDFEDALTRPYREWEYCVQYRETSFDFISRLMEQEGIYYWFRHEQKRHILVLSDAYGAHRSPGGYASVPY YPPTLGHRERDHFFDWQMAREVQPGSLTLNDYDFQRPGARLEVRSNIARPHAAADYPLYDYPGEYVQSQDGEQYARNRIEAIQAQHERVRLRGVVRGIGA GHLFRLSGYPRDDQNREYLVVGAEYRVVQELYETGSGGAGSQFESELDCIDASQSFRLLPQTPVPVVRGPQTAVVVGPKGEEIWTDQYGRVKVHFHWDRH DQSNENSSCWIRVSQAWAGKNWGSMQIPRIGQEVIVSFLEGDPDRPIITGRVYNAEQTVPYELPANATQSGMKSRSSKGGTPANFNEIRMEDKKGAEQLY IHAERNQDNLVENDASLSVGHDRNKSIGHDELARIGNNRTRAVKLNDTLLVGGAKSDSVTGTYLIEAGAQIRLVCGKSVVEFNADGTINISGSAFNLYAS GNGNIDTGGRLDLNSGGASEVDAKGKGVQGTIDGQVQAMFPPPAKG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site