Strain | Pseudomonas aeruginosa strain P7-L633/96 contig8, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CATGAGTCGGTGATCCGCCGGGCGCTGCTTTGCGCCGAAAGGGTCGCCCTGGTGCCGAGCCACCGCCACGCCTTCGGCAAGCGCATGGGCGATTTCGAGC TGCGCTGCCGCTGGCTGGCGCGGCTGGCCCGGCGGATCGATCCGCGGCGGGTGTATTGCGAGCCGATCGAAGCAGGATTGATGCCCGATCGTCCGGCGGT CTACAGCATCGACCTGCTGGAAGCGCTGGCCGCGCGTAGCGGCCTGGCGTCAGCGCGGATCGCCCTGCTGATCGGCGCCGACAACGAGGCGGAGCTGCCG CGCTTCGAACGCGCCGCCGAATTGTGCTGGCGCTTCGGCCGGCTGGTGGCGGAGGAGCGGCTGCCGCTGCACAGCTCGATGATCCGCCAGCGCCTGCGCG AAGGACTGGCGATACCGGAGGCCTGGTGCCTGCCGGAAGTGAAGGACGAACTGCACTGCTATGGCGGCGAACGCCAGGCGGTCTGAAGAGAGGAGTGACG
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DNA Sequence for Gene |
>D407_RS03675
ATGAGTTCAGCGGAAGTATTGGCCAGCGTGGATATCGTGGCGTTGCGCCTGAACCCCGGGCACGGACTGGAGCTGTTGCTGATCCGCCGCGCCCAGGCGC CTTTCGCCGGCCAGTGGGCCTTGCCCGGCGTGCTGGTCAACGGCCGCAGCGCCGACCACAGCCTCGACGACGCGGCGGTGCGCGCCCTGCGCGACAAGGC GCGGCTGGAGCCGGCCTACATCGAGCAGGTGGCCACGGTCGGCAACGCGGTACGCGACCCGCGCGGCTGGTCGCTGAGCGTGTTCTATCTGGTGCTGGTC GGTCCGGACACCCGGGTGGAGGACGACGACCTCGACTTCGTGCCGCTGCGCGACGTTCGCAGCGAGCGCTTCGCCCTGCCGTTCGACCACGCCCAACTGG TACAGCAGGCCTGCGAGCGCCTGGCGAGCAAGTCGGTGTACAGCGCCCTGCCGCTGTTCCTGCTGGCGCCGCGCTTCACCGTGGCCGAGGCGCTGAAGGC CTTCGAGTGCGCCATCGGCCAGGAAGTCCAGCATTCCAGCCTGCGCGGGCGCCTGGAGCGGATGAAAGAGGCTGGCTGGGTCGAGGACACCGGCGAACGC CAGCGTCCGCCCATGGGGCGCCCGCAACACGTCCTGCATTTCACCCCGAAGCCGGGCGGCGCCTTCGTTTTCGACCGCAGCCTGCTGGCGTCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CAAACGGGTGCGGCAGGGCCGGTGAGGCCGCTCCCTGCCGCGCTTGCTAGACGGTGAAGCGCTGGATCTGCTGCTCCAGTCCGTTTGCCAGCTTCGCCAG CTCGACACTGGAGGTGGAGGTCTTCACCGCGCCCTCGGCGACTTCACCGATGCTGGCATTGAGCGAGTCGATGTTCTGGCTGACCTCGCTCGCGGTGGCG GTCTGTTCTTCCGTCGCCGTGGATATCTGCGCGTTGCTCTGGGCGATACCTTCGACCGCCTGGGCGATGAGACCGAGCGCCTTTCCCGCCTCGTGGGCGC GCTGGACGCTGACCTGGGCCTGCTCGCGTGACTGCTGCATCACGCTGACCGCGCTGCTGGCGCCTGCCTGCAGGGCTTCGATCATCTCGCGGATGGTTTC GGTGGCCTTGTGCGTATTGGTGGCCAGGCTGCGCACTTCATCGGCGACCACCGCGAACCCGCGTCCGGCCTCGCCCGCCCGTGCGGCTTCTATCGCGGCA
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Amino Acid Sequence |
>hypothetical protein
MSSAEVLASVDIVALRLNPGHGLELLLIRRAQAPFAGQWALPGVLVNGRSADHSLDDAAVRALRDKARLEPAYIEQVATVGNAVRDPRGWSLSVFYLVLV GPDTRVEDDDLDFVPLRDVRSERFALPFDHAQLVQQACERLASKSVYSALPLFLLAPRFTVAEALKAFECAIGQEVQHSSLRGRLERMKEAGWVEDTGER QRPPMGRPQHVLHFTPKPGGAFVFDRSLLAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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