Pseudomonas aeruginosa P7-L633/96, D407_RS02375
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain P7-L633/96 contig8, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCGCTTCGCCCTGGGTCTCGGCCTGAGCCTGGACGACGGAGTCCTGCCCGACGCCGCCGACGAGCCGCACAACCTCAGCGCCAAGGTCGAGGCCTTCGA GCGCTCGCTGATCGCTGCCGAACTGGAACGCCCGCACAATTCGCTGCGCAGCGTCGCCGAGGCCCTCGGTATCCCGCGCAAGACCCTGCACGACAAGCTG CGCAAGCACGGCCTGCCGTTCAATACGCCTGGCGAAAATCCGCCAGATGATGGCGAATGAATGGCGGATTACCGCCAACCGTTCGCCATCCGCGCCCGCA GCATCTCCCCTGCGTACCCTTGCCCGACTGGCACAGGGCTTGCTCACGGCTTCCCGAGCGTTCCAACAAGCAGAAGACCAGGCGCTTTTCCGATTCACGC AGCATCTGCCGCTGCGCTGCCTAGACTTCCCTTGTTCGGCCACGCCGAGAGGACACCCGTCCTCTTCATAAAAGACAGACAAGAACAAAGAGGAAGTCTC
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| DNA Sequence for Gene |
>D407_RS02375
ATGCTCAAGCACACCGCGAAGGCGCTCGTCTGCGCACTTTCCCTGACCGTCGCCGGAATCGTCCAGGCGGCCGACCCGATCGTCATCAAGTTCTCCCACG TCGTCGCCGAGCACACGCCCAAGGGCCAGGGCGCGCTGCTGTTCAAGAAACTGGTGGAGGAACGCCTGCCGGGCAAGGTCAAGGTGGAGGTCTACCCGAA CTCGTCGCTGTTCGGCGACGGCAAGGAGATGGAAGCCCTGCTGCTGGGCGACGTGCAGATCATCGCGCCGTCGCTGGCCAAGTTCGAGCAGTACACCAAG AAACTGCAGATCTTCGACCTGCCGTTCCTGTTCGACAACATCCAGGCGGTCGACCGCTTCCAGCAGAGCCCGCAGGGCAAGGAGCTGCTGACCTCGATGC AGGACAAGGGCATCACCGGCCTCGGCTACTGGCACAACGGGATGAAGCAACTGTCCGCCAACAAGCCCCTGCGCGAGCCGAAGGACGCCCGCGGCCTGAA GTTCCGCGTGCAGGCCTCCAAGGTGCTCGAGGAACAGTTCAAGGCGGTGCGCGCCAACCCGCGCAAGATGAGCTTCGCCGAGGTCTACCAGGGCCTGCAG ACCGGCGTGGTCAACGGTACCGAGAACCCCTGGTCGAACATCTACTCGCAGAAGATGCACGAAGTGCAGAAGTACATCACCGAATCCGACCACGGCGTGC TGGACTACATGGTGATCACCAACACCAAGTTCTGGAACGGCCTGCCGGAAGACGTGCGCGGCGTTCTGGCCAAGACCATGGACGAGGTGACCGTGGAGGT GAACAAGCAGGCCGAGGCGCTCAACCAGGGCGACAAGCAGCGCATCGTCGAGGCCAAGACCAGCGAGATCATCGAACTCACTCCCGAACAGCGGGCCGAA TGGCGCAAGGCCATGCAGCCGGTGTGGAAGAAGTTCGAAGGTGAGATCGGCGCCGACCTGATCAAGGCCGCCGAAGCCGCCAACCAGGCTCAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAAGAAGAGGGAAAGCCCATGCACGCGCTCGCGCGCGTCTGGGCGCGCCTGGAGGAAGGCCTGATCGCCTTCCTCCTCGCCGCCATGACGCTGGTTACCT TCGTTTATGTAGTCCTCAATAACCTCTACACGCTGTTCTACGATCTCGCCGACCTCTGGGAGGGCGGCAACGAGACGCTGCTCGCCATCGGCGACGCCAT CCTCAGCCTGGCCCAGGAGATGACCTGGAGCAACGCCCTGACCAAGGCCCTGTTCGCCTGGCTGATCTTCCTCGGCATCGCCTACGGCGTACGCACCGCC GGGCACCTCGGCGTGGACGTGCTGGTGAAGCTGGCTTCGCGGCCGGTACAGCGGGTCCTCGGCGTGATCGCCTGCCTGGCCTGCCTCGGCTACGCCGGCC TGCTCTGCGTGGCCAGCTACGACTGGGTGAAGACCCTGTTCATCGCCGGCATCGGCGCCGAGGACCTCGACCACTTCGGCATCCGCCAATGGCACATCGG
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| Amino Acid Sequence |
>c4-dicarboxylate-binding protein
MLKHTAKALVCALSLTVAGIVQAADPIVIKFSHVVAEHTPKGQGALLFKKLVEERLPGKVKVEVYPNSSLFGDGKEMEALLLGDVQIIAPSLAKFEQYTK KLQIFDLPFLFDNIQAVDRFQQSPQGKELLTSMQDKGITGLGYWHNGMKQLSANKPLREPKDARGLKFRVQASKVLEEQFKAVRANPRKMSFAEVYQGLQ TGVVNGTENPWSNIYSQKMHEVQKYITESDHGVLDYMVITNTKFWNGLPEDVRGVLAKTMDEVTVEVNKQAEALNQGDKQRIVEAKTSEIIELTPEQRAE WRKAMQPVWKKFEGEIGADLIKAAEAANQAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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