Strain | Pseudomonas aeruginosa strain P7-L633/96 contig49, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGCAGTGCCTACGCGGCCACCAAGGCCGGGTTGCTGGGCATGACCCGCGTCTGGGCGCTGGAGCTGGGCCGGCATGGCATCACCGCCAACGCCATCGGT CCCGGCCCCATCCGCACCGAGCTGTTCGAGCGCGCCAACCCGCCGGACAGCCCGCGCACCCGGGCGATCATCGACAGCGTGCCGGTCAAGCGCCTGGGCG TGCCGGACGACATCGCCCAGGCGGCCTCGTTCTTCCTCGATGCACGCGCTGGCTTCGTCACCGGCCAGGTGCTCTACGTGTGCGGCGGCATGACCGTCGG CGTAGCCGCCGTCTGACCTGCATCACCCCGCTGGCCCGCCTCATCAGCGGGCCAGCAGCTTGTTAATCCGCGGTTAAACACCCCTTCCGCAGACTGAAAT TGTGACCCCCAGGGCGCGCTGGCAAGCTGGTTTCCAGGCGCGATGAAGGCCGGAAAAGGCCGCATCCGCCCGCGATGAAAACGAAAAAGGACCCGCAGTC
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DNA Sequence for Gene |
>D407_RS22665
ATGATCGACAAGCTTTGCCCCAGTGCCGCCCAGGCGCTGGCCGAGATTCCCGACGGCGCGATCATCGCCGTGGGCGGCTTCGGCGGTGCCGGGATGCCCG AAGACCTGATCGACGCGCTGATCGCCCAGGGCGCGCGTGACCTCACCCTGGTGAGCAACAACGCCGGCCAGGGCGATACCGGCCTGGCCGCTCTGCTCAA GGCCGGCCGCGTGCGCCGCATTCTCTGTTCCTACCCGCGCATGGTCGGCTCCCACGTGTTCGAGGAACTGTACCGTGCCGGCAGAATCGAGCTGGAGATC GTCCCCCAGGGCAACCTCGCCGAGCGCCTGCGCGCCGCCGGCTGCGGTATCGGCGGGTTCTTCACCCCCACCGGCTACGGCACGCTGCTCGCCGAAGGCA AGGAAACCCGCCTGATCGACGGCCGCCACTACGTGTTCGAAACCCCAATCCACGTCGACTACGCGCTGATCAACGCCGAGGTCGGCGACCGCTGGGGCAA CCTGGTGTACCGCAAGACCGCGCGCAACTTCAGCCCGGTGATGGCCATGGCCGCGCGCCACACCATCGCCTCGGTGGGCCGTGTCTGCGCCCTGGGCGAG ATCGACCCGGAGCAGGTGGTCACCCCAGGCATCTTCGTCAAACGCATCGTGCAGCGCACCCGCGCCGTCGCCCCCAGTGAAGTCGACCGCAGCAAGGCAG GTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCATGGACAAACAGACCCGCAACGCCATGGCCGCCCGCGTGGCCCGCGACATCCCCGAAGGCGCCTACGTCAACCTGGGCATCGGCCTGCCGACCCTGGT GGCCAACCACCTGCCGGCGGACAAGGACATCTTCCTGCACAGCGAGAACGGCGTGCTCGGCCGCTGGACCGGTGCCAAGCCCGGCGAGGAAGACTGGGAC ATGATCAACGCCGGCAAGGAGCCCATCTGCCTGTCGCCGGGCGCGGCGTTTTTCCACCATGCCGACTCCTTCGGCATGATGCGCGGTGGCCACCTGGACA TCTGCGTGCTCGGCGCCTTCCAGGTTGCGGCCAACGGTGACCTGGCCAACTGGCACACCGGCTCGCCGGACGCCATCCCTGCCGTCGGGGGCGCCATGGA TCTGGCCATCGGCGCCAAGCGTATCTTCGTGATGATGGAGCACTTGGCGAAGGACGGAGCGTGCAAGCTCATCGAACACTGCACCTACCCGCTCACCGGC
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Amino Acid Sequence |
>hypothetical protein
MIDKLCPSAAQALAEIPDGAIIAVGGFGGAGMPEDLIDALIAQGARDLTLVSNNAGQGDTGLAALLKAGRVRRILCSYPRMVGSHVFEELYRAGRIELEI VPQGNLAERLRAAGCGIGGFFTPTGYGTLLAEGKETRLIDGRHYVFETPIHVDYALINAEVGDRWGNLVYRKTARNFSPVMAMAARHTIASVGRVCALGE IDPEQVVTPGIFVKRIVQRTRAVAPSEVDRSKAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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