Pseudomonas aeruginosa P7-L633/96, D407_RS14230
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain P7-L633/96 contig32, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGTGCCGTCGGGCATCAGGCCCTTGCCCTGGGTGGCGCGCACGGCCTGGCAGAGGTTGGTCTTGCCGGACAGGCAGAATTTGCACTTGCCGCACTCGGCG GTGTAGAGCGGGATGACATGGTCGCCCACCTGCAGGGAGGTCACGCCCTCGCCCACCGCTTCGACGATGCCGCCACCTTCGTGGCCCAGAATGCACGGGA ACACCCCCTCGGAATCCTGGCCGGACAGGGTGTACGCATCGGTATGGCAGACGCCGGTGGCGACGATGCGCACCAGTACCTCGCCCTTCTGCGGCGGCGC CACATCCACCTCGACGATTTCCAACGGCTTGTTGGGGGCGAAGGCGACGGCGGCACGGGACTTGATCATCTGGGAACTCCTGAACGATAGAAGCCGGCGG GCCGCTAAGCGACCCACTGAAACGGAAAGTGTAGAAAACCGCGTTTCAAGGAATAATCAGGCAATAATCAAAACATTATTGCCATACAGGGACAATCCAG
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| DNA Sequence for Gene |
>D407_RS14230
ATGAATCGCTGGGAAGGACTCGACGAATTCGTCGCTGTCGCCGAAACCGGGCAGTTCACTGCGGCAGCCGAACGCATGGGCGTTTCCTCGTCGCACATCA GCCGCCAGGTCGCCCGCCTGGAGGAGCGCCTGCAGACCCGCCTGCTCTACCGCAGCACCCGGCGAGTATCGCTGAGCGAAGCCGGACAGACCTTCCTGCA ACATTGCCAGCGCCTGCAGGACGCCCGCGACGAAGCCCTGCGCGCGGTCAGCGACCTCTCCGCGGAGCCCAAGGGCCTGCTGCGCATGACCTGCGCGGTA GCCTACGGCGAACGTTTCATCGTGCCGCTGGTGAATGCCTTCATGGCCGACTATCCGCAACTGCGGGTCGACATCGAGCTGTCCAACCGCCAGTTGGACC TGCTCCACGAGGGCTTCGACCTGGCCATCCGCCTCGGCCGCCTGAGCGATTCGCGATTGGTCGCCACACGGTTGGCGCCACGCCTCATGTACCTCTGCGC CACCCCGGAATACCTGCGCCGCCACGGCACTCCGCAGTCGCCGACGGAACTCGGCCAGTTCAATTGCCTGATCGGCAGCAGCGACCTGTGGAGCTTCCTC GAGGACGGCCGGGAAACCCAGCACCGGGTCCAGGGCAACTGGCGCTGCAACAGCGGCCAGGCGGTGCTCGACGCCGCCCTGCGCGGCTTCGGCCTGTGCC AGCTGCCCGACTACTATGTGATCGAGCATCTGCGCAGCGGCCGCCTGGTCTCCCTGCTGGAAGGCCACCAGCCGCCGAATACCGCGGTATGGGCGCTGTA CCCGCAGCAGCGGCACCTGTCGCCGAAAGTCAGGCAACTGGTGGACTATCTCAAGGAAGGCCTGGCGCAATCCCATCCGGGACTCGCCGGGGAGAAAAAC CTGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGCAGTAAGGCAATTCACCGCTGCGATAGACTTGGCGGTTTCCCGCTCCACCCGCTATCGATTCAAGGAAGTCGCATGTCTGCCCTCAATGCGTTTCGCC AACGCTACCTGGTGAGGTTCTGGTCGCCGCTGCCGGCGCTGGTCGCCCTCGGCGTCGCCTCCGCCTACTACTTCGCGCTCACCGGCACCTTCTGGGCGGT GACCGGCGAATTCACCCGCTGGGGCGGCCACGTGCTGTCCTGGTTCGGCTACCAGCCACAGGACTGGAGCTACTTCAGGCTGATCGGCCTTCAAGGCACG CCGCTGGACCGGATCGACGGAGTGATGATCATCGGCATGTTCCTCGGCGCCCTGTGCTGCGCCCTCTGGGCCGGCAACGTCAGCCTGCGCTGGCCGACCA GCAAACGTCGCCTGCTGCAGGGCCTGGTCGGCGGTATCGTCGCCGGCTTCGGCGCGCGCCTGGCGATGGGCTGCAACCTGGCGGCGTTCTTCACCGGTAT
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| Amino Acid Sequence |
>LysR family transcriptional regulator
MNRWEGLDEFVAVAETGQFTAAAERMGVSSSHISRQVARLEERLQTRLLYRSTRRVSLSEAGQTFLQHCQRLQDARDEALRAVSDLSAEPKGLLRMTCAV AYGERFIVPLVNAFMADYPQLRVDIELSNRQLDLLHEGFDLAIRLGRLSDSRLVATRLAPRLMYLCATPEYLRRHGTPQSPTELGQFNCLIGSSDLWSFL EDGRETQHRVQGNWRCNSGQAVLDAALRGFGLCQLPDYYVIEHLRSGRLVSLLEGHQPPNTAVWALYPQQRHLSPKVRQLVDYLKEGLAQSHPGLAGEKN LR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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