Strain | Pseudomonas aeruginosa strain PSE305. [Details] | |
DNA Sequence Upstream of Gene |
GCTGCTGTCGGCCCTTGGCGTGGCGTCCCTGCTGAAGGCCGAGCCGATGCTGTTCATCGGCCTGAAGTACCTCGGTGCGGCCTACCTGTTCTATCTCGGC GTCGGCATGCTGCGGGGCGCCTGGCGCAAGCTGCGCAATCCCGAAGCGACGGCGGCGCAGGCCGAACAGGTGGATGTCCACCAGCCGTTCCGCAAGGCGC TGCTGCTCAGCCTGTCGAATCCCAAGGCGATCCTGTTCTTCATCTCCTTCTTCATCCAGTTCGTCGATCCCGGCTATGCCTATCCGGGCCTGTCGTTCCT GGTGCTGGCGGTGATCCTGGAACTGGTCAGCGCCCTTTACCTGAGCTTCCTGATTTTCACCGGTGTGCGGCTGGCGGCCTGGTTCCGCCGGCGGCAACGG TTGGCTGCCGGCGCCACTTCGGGCGTCGGCGCCCTGTTCGTCGGCTTTGGTGTGAAGCTGGCCACCGCAACCCTGTCCTGATTATTGCAACGAGAGTCCC
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DNA Sequence for Gene |
>TY30_RS22760
|carB
ATGCCAAAACGTACAGACATAAAGAGCATCCTGATCCTCGGTGCCGGCCCCATCGTGATTGGCCAGGCCTGCGAATTCGACTACTCCGGCGCCCAGGCCT GCAAGGCCCTGCGCGAGGAGGGCTACCGCGTCATCCTGGTGAACTCCAACCCCGCGACCATCATGACCGATCCGGCGATGGCCGACGCGACCTACATCGA GCCGATCAAGTGGGCCACCGTGGCCAAGATCATCGAGAAGGAACGCCCCGACGCGCTGCTGCCGACCATGGGCGGCCAGACTGCGCTGAACTGCGCCCTG GACCTGGAGCGCCACGGCGTGCTGGAGAAGTTCGGCGTGGAGATGATCGGCGCCAATGCCGATACCATCGACAAGGCCGAGGACCGCTCGCGCTTCGACA AGGCGATGAAGGATATCGGCCTGGCCTGTCCGCGCTCGGGCATCGCCCACAGCATGGAGGAGGCCTACGGCGTGCTCGAGCAGGTCGGCTTCCCCTGCAT CATCCGTCCGTCCTTCACCATGGGCGGCACCGGCGGCGGTATCGCCTACAACCGTGAAGAGTTCGAAGAGATCTGCGCCCGTGGCCTCGACCTGTCGCCG ACCAACGAGCTGCTGATCGACGAGTCGCTGATCGGCTGGAAGGAATACGAGATGGAGGTGGTCCGCGACAAGAAGGACAACTGCATCATCGTCTGCTCCA TCGAGAACTTCGACCCGATGGGCGTGCACACCGGTGACTCGATCACCGTGGCACCGGCGCAGACCCTGACCGACAAGGAATACCAGATCATGCGCAACGC CTCGCTGGCGGTATTGCGCGAGATCGGCGTGGAAACCGGCGGTTCCAACGTGCAGTTCGGCATCTGCCCGAACACCGGGCGCATGGTGGTGATCGAGATG AACCCGCGGGTTTCCCGCTCCTCGGCCCTGGCCTCCAAGGCCACCGGTTTCCCGATCGCCAAGATCGCCGCCAAGCTGGCGGTCGGCTACACCCTCGACG AACTGCAGAACGACATCACCGGCGGTCGCACCCCGGCGTCGTTCGAGCCGGCCATCGACTACGTGGTGACCAAGATCCCGCGCTTCGCCTTCGAGAAATT CCCGAAAGCCGATGCCCGCCTGACCACCCAGATGAAGTCGGTCGGCGAAGTCATGGCCATCGGCCGGACCTTCCAGGAGTCGGTGCAGAAAGCCTTGCGC GGCCTGGAAGTCGGCGCCACCGGCTTCGATCCGAAGCTCGACCTGAACGACCCGGAGGCCGACAGCATCCTCAAGCGCGAGCTGACCGTGCCCAGCGCCG AGCGTGTCTGGTACGTCGCCGACGCCTTCCGCGCCGGCAAGAGCGTCGAGGAAGTGTTCGAGCTGACCCGCATCGACGAATGGTTCCTGGTGCAGATCGA GGACCTGGTCAAGGACGAGGAGAAGGTCAAGACCCTCGGCCTGTCCTCCATCGATCGCGAGCTGATGTACAAGCTCAAGCGCAAGGGCTTCTCCGACGCG CGCCTGGCCAAGCTGCTCGGCGTCACCGAGAAGAACCTGCGCAGCCATCGCCACAAGCTGAAGGTGCTGCCGGTCTACAAGCGTGTCGATACCTGCGCCG CCGAGTTCGCCACCGACACCGCCTACATGTATTCGACCTACGAGGAAGAGTGCGAGGCCAACCCGTCGAGCCGCGAGAAGATCATGATCCTCGGCGGCGG TCCGAACCGCATCGGCCAGGGCATCGAGTTCGACTACTGCTGCGTGCACGCGGCGCTGGCGATGCGCGAAGACGGCTACGAGACCATCATGGTCAACTGC AACCCGGAAACCGTCTCCACCGACTATGACACCTCCGACCGCCTGTACTTCGAGCCGGTGACCCTCGAGGACGTCCTTGAGATCGTCCGCGTCGAGCAGC CCAAGGGCGTGATCGTCCAGTACGGCGGCCAGACCCCGCTGAAGCTCTGCCGCGCCCTCGAAGAGGCCGGCGTGCCGATCATCGGCACCAGTCCGGACGC CATCGACCGTGCCGAAGACCGCGAGCGCTTCCAGCAGATGGTCCAGCGCCTGAACCTGCGCCAGCCGGCCAACGCCACCGCGCGCAGCGAAGACGAGGCC CTGGCCGCGTCCAAGGCCATCGGTTATCCGCTGGTGGTACGCCCGTCCTACGTGCTGGGCGGGCGGGCGATGGAAATCGTCTACCAGGAAGAAGAGCTCA AGCGCTACATGCGTGAGGCGGTTCAGGTTTCCAACGACAGCCCGGTGCTGCTCGACCACTTCCTCAACTGCGCCATCGAAGTCGACATCGACGCGGTATG CGACGGCGAGATCGTGGTGATCGGCGCGATCATGCAGCATATCGAGCAGGCTGGCGTTCACTCCGGCGACTCCGCCTGTTCGCTGCCGCCGTACTCGCTG CCGCAGCACATCCAGGACGAGATCCGCGAGCAGGTCAAGAAAATGGCCCTGGAGCTTGGCGTGGTCGGCCTGATGAACGTGCAGATGGCGGTGCAGGGCG AGGATATCTTCGTCATCGAGGTCAATCCGCGCGCCTCGCGTACCGTGCCGTTCGTCTCCAAGTGCGTCGGCGAGTCGCTGGCCAAGGTCGCCGCCCGCGT CATGGCCGGCAAGACCCTGGCCGAGGTCGGCTTCACCCAGGAAATCATCCCGCCGTTCTTTAGCGTCAAGGAAGCGGTGTTCCCGTTCGCCAAGTTCCCC GGCGTCGATCCGATCCTCGGCCCGGAAATGAAGTCCACTGGTGAAGTGATGGGCGTCGGTGATAGCTTTGCCGAAGCCTTTGCCAAGGCTCAGTTGGGGG CCAGCGAGATCCTCCCGACCGCCGGTTGCGCCTTCATCAGCGTCCGCGAAGACGACAAGCCGTTCGCCGCCCAGGTGGCTGGCGACCTGGTCGCGCTGGG CTTCGAAGTGGTAGCCACCGCCGGTACCGCGCGTGTCATCGAGGCCGCGGGCCTGCCGGTGCGTCGCGTGAACAAGGTGACCGAAGGTCGCCCGCACGTG GTGGACATGATCAAGAACGACGAGGTCACCCTGATCATCAACACCACCGAGGGCCGGCAGTCCATCGCTGACTCCTACTCCATTCGTCGAAACGCCCTGC AGCACAAGATCTGCTGCACCACCACCATTGCGGGTGGGCAGGCGATCTGTGAGGCGCTCAAGTTCGGTCCCGAGAAGACCGTTCGGCGTCTGCAGGATCT CCACGCAGGAATCAAGGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCAAGTTCCCCATGACCGTCCAGGGCGCCCGCGCCCTGGAAGAAGAAGTGAAACACCTGAAGGGCGTGCTGCGCCCGCAGATCAGCCAGGCCATAGCCGA AGCGCGTGAACTGGGCGACCTCAAGGAAAACGCCGAGTACCATGCGGCGCGCGAACAGCAGGGCATGGTCGAGGCGCGTATCCGCGACATCGAGGCCAAG CTGTCCAACGCTCAGGTCATCGATGTCACCGCCATCCCGCACAGCGGCAAGGTGATCTTCGGCACCACCGTCGACATCGCCAACGTCGAGACCGACGAGA CCGTGACCTACCAGATCGTCGGCGACGACGAGGCGGATATCAAGGGTGGCAAGATCTCGGTGAATTCGCCGATCGCCCGTGCGCTGATTGGCAAGACCGA AGGCGATGCCGTGCTGGTGAGAACCCCGGGCGGCGACGTCGAGTACGAGATCGTCGAGGTTCGCCATATCTAAGCGCGCTCCGTTGCGCGCAGGCGCGAT
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Amino Acid Sequence |
>carbamoyl-phosphate synthase large chain
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMADATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCAL DLERHGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKDIGLACPRSGIAHSMEEAYGVLEQVGFPCIIRPSFTMGGTGGGIAYNREEFEEICARGLDLSP TNELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEM NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPAIDYVVTKIPRFAFEKFPKADARLTTQMKSVGEVMAIGRTFQESVQKALR GLEVGATGFDPKLDLNDPEADSILKRELTVPSAERVWYVADAFRAGKSVEEVFELTRIDEWFLVQIEDLVKDEEKVKTLGLSSIDRELMYKLKRKGFSDA RLAKLLGVTEKNLRSHRHKLKVLPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSSREKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKLCRALEEAGVPIIGTSPDAIDRAEDRERFQQMVQRLNLRQPANATARSEDEA LAASKAIGYPLVVRPSYVLGGRAMEIVYQEEELKRYMREAVQVSNDSPVLLDHFLNCAIEVDIDAVCDGEIVVIGAIMQHIEQAGVHSGDSACSLPPYSL PQHIQDEIREQVKKMALELGVVGLMNVQMAVQGEDIFVIEVNPRASRTVPFVSKCVGESLAKVAARVMAGKTLAEVGFTQEIIPPFFSVKEAVFPFAKFP GVDPILGPEMKSTGEVMGVGDSFAEAFAKAQLGASEILPTAGCAFISVREDDKPFAAQVAGDLVALGFEVVATAGTARVIEAAGLPVRRVNKVTEGRPHV VDMIKNDEVTLIINTTEGRQSIADSYSIRRNALQHKICCTTTIAGGQAICEALKFGPEKTVRRLQDLHAGIKA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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