Pseudomonas aeruginosa PSE305, TY30_RS19450
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain PSE305. [Details] | |
| DNA Sequence Upstream of Gene |
GGTGCCGTCGGGCATCAGGCCCTTGCCCTGGGTGGCGCGCACGGCCTGGCAGAGGTTGGTCTTGCCGGACAGGCAGAATTTGCACTTGCCGCACTCGGCG GTGTAGAGCGGGATGACATGGTCGCCCACCTGCAGGGAGGTCACGCCCTCGCCCACCGCTTCGACGATACCGCCACCTTCGTGGCCCAGGATGCACGGGA ACACCCCCTCGGAATCCTGGCCGGACAGGGTGTACGCGTCGGTATGGCAGACGCCGGTGGCGACGATGCGCACCAGTACCTCGCCCTTCTGCGGCGGCGC CACATCCACCTCGACGATTTCCAACGGCTTGTTGGGGGCGAAGGCGACGGCGGCACGGGACTTGATCATCTGGGAACTCCTGAACGATGGAAGCCGGCGG GCCGCTAAGCGACCCACTGAAACGGAAAGTGTAGAAAACCGCGTTTCAAGGAATAATCAGGCAATAATCAAAACATTATTGCCATACAGGGACAATCCAG
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| DNA Sequence for Gene |
>TY30_RS19450
ATGAATCGCTGGGAAGGACTCGACGAATTCGTCGCTGTCGCCGAAACCGGGCAGTTCACCGCGGCAGCCGAACGCATGGGCGTTTCCTCGTCGCACATCA GCCGCCAGGTCGCCCGCCTGGAGGAGCGCCTGCAGACCCGCCTGCTCTACCGCAGCACCCGGCGAGTATCGCTGAGCGAAGCCGGACAGACCTTCCTGCA ACATTGCCAGCGCCTGCAGGACGCCCGCGACGAAGCCCTGCGCGCGGTCAGCGACCTCTCCGCGGAGCCCAAGGGCCTGCTGCGCATGACCTGCGCGGTA GCCTACGGCGAACGTTTCATCGTGCCGCTGGTGAATGCCTTCATGGCCGACTATCCGCAACTGCGGGTCGACATCGAGCTGTCCAACCGCCAGTTGGACC TGCTCCACGAGGGCTTCGACCTGGCCATCCGCCTCGGCCGCCTGAGCGATTCGCGATTGGTCGCCACACGGTTGGCACCACGCGTCATGTACCTCTGCGC CACCCCGGAATACCTGCGCCGCCACGGCACTCCGCAGTCGCCGGCGGAACTCGGCCAGTTCAACTGCCTGATCGGCAGCAGCGACCTGTGGAGCTTCCTC GAGGACGGCCGGGAAACCCAGCACCGGGTCCAGGGCAACTGGCGCTGCAACAGCGGCCAGGCGGTGCTCGACGCCGCCCTGCGCGGCTTCGGCCTGTGCC AGCTGCCCGACTACTATGTGATCGAGCATCTGCGCAGCGGCCGCCTGGTCTCCCTGCTGGAAGGCCACCAGCCGCCGAATACCGCGGTATGGGCGCTGTA CCCGCAGCAGCGGCACCTGTCGCCGAAAGTCAGGCAACTGGTGGACTATCTCAAGGAAGGCCTGGCGCAATCCCATCCGGGACTCGCCGGGGAGAAAAAC CTGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGCAGTAAGGCGATTCACCGCTGCGATAGACTTGGCGGTTTCCCGTTCCACCCGCTATCGATTCAAGGAAGTCGCATGTCTGCCTTCAATGCGTTTCGCC AACGCTACCTGGTGAGGTTCTGGTCGCCGCTGCCGGCGCTGGTCGCCCTCGGCGTCGCCTCCGCCTACTACTTCGCGCTCACCGGCACCTTCTGGGCGGT GACCGGCGAATTCACCCGCTGGGGCGGCCACGTGCTGTCCTGGTTCGGCTACCAGCCACAGGACTGGAGCTACTTCAGGCTGATCGGCCTTCAAGGCACG CCGCTGGACCGGATCGACGGAGTGATGATCATCGGCATGTTACTCGGCGCCCTGTGCTGCGCCCTCTGGGCCGGCAACGTCAGCCTGCGCTGGCCGACCA GCAAACGTCGCCTGCTGCAGGGCCTGGTCGGCGGTATCGTCGCCGGCTTCGGCGCGCGCCTGGCGATGGGCTGCAACCTGGCGGCGTTCTTCACCGGTAT
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| Amino Acid Sequence |
>LysR family transcriptional regulator
MNRWEGLDEFVAVAETGQFTAAAERMGVSSSHISRQVARLEERLQTRLLYRSTRRVSLSEAGQTFLQHCQRLQDARDEALRAVSDLSAEPKGLLRMTCAV AYGERFIVPLVNAFMADYPQLRVDIELSNRQLDLLHEGFDLAIRLGRLSDSRLVATRLAPRVMYLCATPEYLRRHGTPQSPAELGQFNCLIGSSDLWSFL EDGRETQHRVQGNWRCNSGQAVLDAALRGFGLCQLPDYYVIEHLRSGRLVSLLEGHQPPNTAVWALYPQQRHLSPKVRQLVDYLKEGLAQSHPGLAGEKN LR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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