Pseudomonas aeruginosa PSE305, TY30_RS09560

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain PSE305. [Details]
DNA Sequence Upstream of Gene
GGTGCGCCTGGGCGCCGACGGCGAAGCGCGCCGGCTGGCCTTCGACGGCCTGCCGGACGCCTGGACCCGCGGCATGCTGATGGCCGACCGGATGCCGCTG GCCGAGGTGCTCGCCGAACTCGCCCGCTACCGTCGCGGCTTACTGCGCTGCGACCCGCAACTGGCCAGGCTGGCGGTGTCGGGCGCCTATCCGCTGCTGG ACCTGCGGCGCACGCTGGGCATGCTGCAGGCCACCTATCCGCTGAAGGTGCGCGGGGTGACCGACTACTGGATCAGCCTGGTGCCGGCGTGACGGCGCGG CCGCCATCCCCGTGGCAACCGCCCCCTCGCGTCCACCCCGGCAGGCCGTCCGCCGTTGCGCCGGAACAGGCGTTGCCATCGACATACCGTGCTCCGCAGA AAAATAACCGCCTCGACCTGAGACCTTTTTCCTTCTCGGCTGGCAAGTAGAGGAATCCGCCCCGACCCAAGGTCCGCAGAGACCACGAGGAACCCTGTAC
DNA Sequence for Gene
>TY30_RS09560
ATGCCCGTACGCACGCTTCGCCCCCGTTCGCTGTCCCTGGCCATCCACGCCGCCATGACCCTCGCCCTCGCCGGCGCGGCCCCCGCCCTGCTTGCCGCCG AGGCGCCCGCCGCCAGCTCGGCGCACAGCTATGACATCGCCCCCGGCCCGCTCGGCCGTACCCTGTCGGCCTTCGCCAGCGACAACGGGGTATCCCTGGC GTTCGACCCGGCGCTCACCGAGGGTCGCCGCAGCGCCGCCCTGCGCGGCCGCTACGCGCCGGTCGAGGCGCTGCACCGCCTGCTGCTGGGCAGCGGCCTG GAGTTGCAGCAGCGCAGCGATGGCAGCTACACCCTGGTGCCGGCAGCCACCGATGGCGCGCTGGAACTGCAATCCTCGCTGATCACCGCCCAGGCCGCCG GTGCCGAGACCCTGCCCGCCGAGTACGCCGGCGGCCAGGTGGCCCGTGGCGCGCGCCTGGGCATGCTGGGCAACGCCGACGTGATGGATGCGCCATTCAG CATCACCAGCTACACCGCCAGGACCATCGAGCAGCAGCAGGCGCGCAGCGTCGCCGACCTGCTACAGGCCAACGATCCGTCGGTGCGGGTGGTCGGCGGG CGCGGCGACCTGGTGGACAGCTACACGATTCGCGGCTTCAGCGTGCAGAACGCCGACGTCGCCTTCAACGGCCTCTATGGCCTGCTGCCGTTCTGGCGGG TACCGATCGAATTCGCCGAGCGCGTGGAAGTGCTCAAGGGACCGAACGCCCTGCTCGGCGGGATTTCCCCCGGCGGCAGCGTCGGCGGCACCATCAACCT GGTGCCCAAGCGCGCCGACGACCAGCCGCTGACCCGCGTCAGCGTCGACTGGACCCAGCGCGGCCAGCTCGGCACTCACCTCGACATCGGCCGGCGCTTC GGCGAGAACAACGCCTTCGGCGTGCGCTTCAACGGCGTCTACCGCAACGGCGATACCGCCGTCGACCATCAGAGCCGCGAGTTTCCCATGCTCTCCCTGG GCCTGGACTTCCGTGGCGAGCGCCTGCGCCTGTCCAGCGACCTGCTGTACCAGAAGGAAAGCCTGGAAGGCGTGGTGCGCCCGCTGCTGACCGGCCCGGG AACCACCCACATCCCCCACGCCCCGGACTCGAAGACACGCTTCGGCCTGCGCGATTCCTACCTGGACCAGGAGGATTACTCCATGGTCAACCGCGGCGAG TACGACCTCGCCGACAACCTGACGGCGTTCGCCAGCATCGGCGGCCGCCAGAGCAACTACGAAACCATCGCCGCCAACAGCATCCTCGTCGGCAACCAGG GCGATATCGTCAACAGCCTGGCACGCCAGCGCGGCGACCGCCGCACCTATTCCGCCGAGGTCGGCCTGCGCGGCAACTTCGACACCGGCCCGCTCCGCCA CGACTGGACGCTCAGCGCCAACCGCCTGCACGAACGGCTGGGCATGGTCTATGCCTTCACCGGGATGCAGCCGGGCAACCTCTACCAGACCTCGCCGCAT ACGCCGCTGCCGGACTTCTCCAGCCTCGACGGGAGCATTCCGAAGACCAATGAAACCGACCTCGGCGGCGTGGCGCTGGCCGACAGGCTGTCGTTCCTCG AGGATCGCGTGCAGGTCACCCTGGGCGTGCGCCGCCAGCAGATCGAGTCGCGCAACTACGACCAGACCAGCGGCGCGCGCACCAGCCACGACAAGCGGCA CGTGTGGACGCCGATGGCCAGCGTGCTGGTCAAGCCGCTGCAGGACCTGTCGCTGTACGCCAACTACATCCAGGGCCTCAGCCAGGGCGAGGCGGCGCCG ATGACCGCGGCCAACGCCGGCCAGGTGCTGGCACCATACAAGGCCGAGCAATACGAGATCGGCGCCAAGTACGACCTGGGCGGCTTCACCACCACCCTGG CGCTGTTCGAGATCAGGAAACCGAACGCCTATACCGACGCCAGCAACGTCTTCCGCGCCGACGGCGAGCAACGCAACCGCGGCGTGGAGCTGAGCCTCTA TGGCGAACCGCTGGACGGCGTGCGGGTGATGGCCGGCGCCACCTACATCAAGCCCGAGCAGAACAAGACCGGCGACCCTGCCAGCGAAGGCAAGGACGCG CCCGGCGTGGCCCGTCGCCAGGCCAACCTGGGGGTCAGCTGGGACACCCCGTTCGTCGACGGACTGACCCTCGACAGCCGCTGGATCTACACCGGCTCGG CCTATGTGGACAGCGCCAACGCCCTCTCCGTGCCGCACTGGAACCGCGTCGACCTCGGCGCCGCCTACGCCTTCCAGGTCGCCGGCAAGCCGCTGGTGGC GCGCGCCAACCTGGAGAACGCGCTGGGCAAGGACTACTGGACCGCAGCCAACGGCTACCTGTCGATCAGCTCGCCGCGCACCCTTTCCCTTTCCCTCACG GCGGACTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCCGCCCCACCATAACCAGAAACCGCCGATGACCAGCCTATGACCGCGAAAACCCTGCGCACCTGGTACCTGGTGCACAAATGGACCAGCCTGATCTCC ACGATCTTCCTGCTGATGCTTTGCCTCACCGGGTTGCCGCTGATCTTCCACGAGGAGATCGAGCACTACTTCGAGCCGCATCCGCAGCTCGAGCCGCTCA CCGCCGAGTCGCCGCGCATCGACTACGACGACGTGATCGCCCGCGCCCTGGCCGCCCGGCCGGGCGAAGTGGTGCGCTTCCTGGTATTCGAAAAGGACGA CCCGCTGGGCCTGGTGATCAGCGCGCCGAGCCTGGTACCGCCGCCGGAGAACGGCCACATGCAGCCGTTCGACGCGCGTACCGGGGAATTCTTCGACGCG CTGCCGCCGCCGGGCGGCTTCATGTACCTGATGCTGAAGCTGCACACCGACCTGTTCCTCGGCCTGCCCGGCTACCTGTTCCTCGGCCTGATGGGCCTGC
Amino Acid Sequence
>ligand-gated channel
MPVRTLRPRSLSLAIHAAMTLALAGAAPALLAAEAPAASSAHSYDIAPGPLGRTLSAFASDNGVSLAFDPALTEGRRSAALRGRYAPVEALHRLLLGSGL ELQQRSDGSYTLVPAATDGALELQSSLITAQAAGAETLPAEYAGGQVARGARLGMLGNADVMDAPFSITSYTARTIEQQQARSVADLLQANDPSVRVVGG RGDLVDSYTIRGFSVQNADVAFNGLYGLLPFWRVPIEFAERVEVLKGPNALLGGISPGGSVGGTINLVPKRADDQPLTRVSVDWTQRGQLGTHLDIGRRF GENNAFGVRFNGVYRNGDTAVDHQSREFPMLSLGLDFRGERLRLSSDLLYQKESLEGVVRPLLTGPGTTHIPHAPDSKTRFGLRDSYLDQEDYSMVNRGE YDLADNLTAFASIGGRQSNYETIAANSILVGNQGDIVNSLARQRGDRRTYSAEVGLRGNFDTGPLRHDWTLSANRLHERLGMVYAFTGMQPGNLYQTSPH TPLPDFSSLDGSIPKTNETDLGGVALADRLSFLEDRVQVTLGVRRQQIESRNYDQTSGARTSHDKRHVWTPMASVLVKPLQDLSLYANYIQGLSQGEAAP MTAANAGQVLAPYKAEQYEIGAKYDLGGFTTTLALFEIRKPNAYTDASNVFRADGEQRNRGVELSLYGEPLDGVRVMAGATYIKPEQNKTGDPASEGKDA PGVARRQANLGVSWDTPFVDGLTLDSRWIYTGSAYVDSANALSVPHWNRVDLGAAYAFQVAGKPLVARANLENALGKDYWTAANGYLSISSPRTLSLSLT ADF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site