Strain | Pseudomonas aeruginosa PA96. [Details] | |
DNA Sequence Upstream of Gene |
TCCGGTGCGGACGATATGCGTGCCCCACACCAGCAGGGCGACGGCAGAGAGCAGGTCGAGCAGTTTCAGCATGGCGTGGCCCCCCTGGCACTACGACGAA TGGCCAACCTCGCGCCAGGTTCCGCGTGCGTTGCGCCGCGGAGCCCGGACAACGGCGCCAACGGCCACGATGGAAAGGCAGCGTTCAGGCGAGTTGTAAC ACGAACGTCATATTTGGACAGGCGCCCCCCGCGGGAGTTCGTCTCGGCAGCCCGAGCGGCAGGGCGCCTACCCTTCATTCAAGCGTGCGCGCCGGGAAAC GGCGAGGATTTTTTCGCCTTCCGTGCGATGCATGCGTTTGCGCCACAGGCCATGGAATTAGCCGACAGGAAGGGTATCCTTTGCACCTTTTAAAAAGCCC CGGTCTAGAGGGATACAGAGGAGTGGTGCGGATGCGATTTTCGGGGATCAGTGGCTGCCTCTCGGCAGCGGTGTTGGCGCTCGGGGTAGGGGGAGCGCCG
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DNA Sequence for Gene |
>PA96_RS29025
GTGGTTCAGGCCGATGCGCTGGGCGATAGCCTGGAGCAGGCGCACATCCGCAAGGCGACCTTCGCCGCGCCGGCCTGGGAAGGCTATACCAACGCCGACG GCAGCGGTCTGTACTGGGACCTGCTGAAGCAGGTCTATGCGCCCTACGGGCTTGACGTGAAATTCATCAACATGCCCTGGAACCGCGCCAACAAGCTGAT GACCGCGGGCTCCATGGTCGATGGCGTGCCGGGCGAGATCCCCGGCGTTGAGGGCAAGCTGTACGCCCAGTTGCCGATCGACATCGAGTACCACGGCGTG ATGCATGCGGCGAAGACGCCCTTTTCCGGCCGCGCCAGCCTCACCGGCAAGCGCGTCGGCTGGCGCCATAGCTACAACCTGATCCCCGCGGAGCAGCGCG ACTTCACCCTGGTCGAGTGCGTCCGCCCCGAGCGTTGCACCGAGCAGGTCCAGAACGGCGAGCTGGATTTCTTCCTCGACGAGCCGGACGAACTGGAAAA GCAGCGCAGCGAAGCGCATCTGCCGGCCGATGCCTATCCGATCGCGCAACTGCCGCCCGGCAAGGAGTCCTTCATGACCTTCGCCGACAGCGCCAGCGGC CGGCTCCTGCGCGAGGTCTATGACGCGCGGGTACGGCAGATGGCGGCGTCCGGCGAGCTGCGGGCGCTCTACCAGCGCTGGAACAGCGAGGTGCCCGGCG CCGTGCAGGCCCTTTCGGCGCAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGCGCCGCTCATTTCCACCGCGGAGCCTTTCCGGGGCTTGCGCGGCGGGAATGAAACGCCTAGGATTCGCCCTTCATTTCCCCCACTCACGCACCGCAAA GGAGGTTACATCGATGATTCAGTTCTCTACCCTTTGCAGGCTGCGCCTGGCCTAACGGCCACCGAAACCTACCGCTCGACTCCCTGCACCGCTGAACGAT TCCCGCCCTTGCGTCCGCGCAAGCTTCCGGCGAGAGGTCATCGGCTGCCGCGGTCACCGCTCCCCAGGTTTTCACTTCTCCGTTAGACGCCCTTCGCCCT TCCGCGAGTGCCCGCTCGGCTTCGGTCTGCCCCCCGGATCTACCGTTTCAATCACATGGATTGGATTATGGGCAACTACATCAAGCCTTTGTCCGCGGGC GTCGCACTGATCGCCTCGGACAGCACCTGGATCGAAGGCAAGGCGATCCAGCAACTGCAAACCACCGCCGAGCTGGACGGCATGCGCCGCGTCGTCGGTC
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Amino Acid Sequence |
>hypothetical protein
MVQADALGDSLEQAHIRKATFAAPAWEGYTNADGSGLYWDLLKQVYAPYGLDVKFINMPWNRANKLMTAGSMVDGVPGEIPGVEGKLYAQLPIDIEYHGV MHAAKTPFSGRASLTGKRVGWRHSYNLIPAEQRDFTLVECVRPERCTEQVQNGELDFFLDEPDELEKQRSEAHLPADAYPIAQLPPGKESFMTFADSASG RLLREVYDARVRQMAASGELRALYQRWNSEVPGAVQALSAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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