Strain | Pseudomonas aeruginosa LESlike1 sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCCCGCGCCTGGACCGCCTGGATTCGGCGCGGATCGGCAGCTCGCGGGCGATCACCCAGCTCATCCTGCACCTGGTCGAAGGCACGCCGATCCGCCTGG TCGACGGCGGCGCGCAGAAGCGCTGCTTCACCGACGTCGACGACGGCATCGAGGCCCTCGCGCGGATCATCGACAACCGCGACGGCCGCTGCGACGGGCA GATCGTCAACATCGGCAACCCGGACAACGAGGCGAGCATCCGCCAGCTCGGCGAGGAACTGCTGCGCCAGTTCGAGGCCCACCCGCTGCGCGCGCAGTTC CCGCCCTTCGCCGGCTTCCGCGAGGTGGAGAGCCGCAGCTTCTACGGCGACGGCTACCAGGACGTGGCCCACCGCAAGCCGAGCATCGACAACGCCCGGC GCCTGCTCGACTGGCAGCCCACCATCGAACTGCGCGAGACCATCGGCAAGACCCTCGACTTCTTCCTCCACGAAGCGCTCCGCGAGCGCGAGGCACAGGC
|
|
DNA Sequence for Gene |
>T225_RS07665
GTGATCCAGGCCGGCCTGCGCATCGACGTCGACACCTTCCGCGGCACCCGCGACGGGGTGCCGCGGCTGCTCGAGCTGCTCGACGAAGCCGGGCTGAAGG CGACCTTCTTCTTCAGCGTCGGCCCGGACAACATGGGCCGCCACCTCTGGCGCCTGGCGCGCCCGGCGTTCTTCTGGAAGATGCTCCGCTCGCGCGCCGC CAGCCTGTATGGCTGGGACATCCTGCTGGCCGGCACCGCCTGGCCGGGCAAGCCGATCGGCCGCGAACTCGGCCCGCTGATGCGGCGGACCCAGGCCGCC GGCCACGAGGTCGGCCTGCACGCCTGGGACCACCATGCCTGGCAGACCCACGCCGGCGTCTGGAGCGTGCAGCAGCTCGGCGAGCAGATCCGCCGCGGCA GCGATTGCCTGGCGGACATCCTCGGCCAGCCGGTGCGTTGTTCCGCCGCCGCCGGCTGGCGCGCCGACGGCCGGGTGGTCGAGGCCAAGCAGCCCTTCGG CTTCCGCTACAACAGCGACTGCCGCGGACGCGGCGCGTTCCGCCCGCGCCTGGCCGACGGCAGCCCTGGCATCCCGCAGGTGCCGGTGAACCTGCCGACC TTCGACGAGGTGGTCGGTCCCGGCCTGCCGCGCGAGGCCTACAACGACTTCATCCTGGAACGCTTCGCCGCTGGCCGCGACAACGTCTACACCATCCATG CCGAGGTCGAGGGGCTGCTCCTCGCCCCGGCGTTCCGCGAACTGCTGCGGCGCGCCGAACGGCGCGGCATCCGCTTCCGCCCGTTGGGCGAACTGCTGCC GGACGATCCGCGCAGCCTGCCGCTGGCCGAACTGGTGCGCGGCCGCCTGGCCGGCCGCGAGGGCTGGCTGGGAGTGCGCCAGCCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCCGCCGCCAGACCTGTTCGCTGCTGCTGATCGCCTTCGGCCTGTTCTACCTGGTTCCATTGAGCAACCATGGCCTGTGGATTCCCGACGAGACCCGCTA CGCGCAGATCAGCCAGGCGATGCTGCTGGGCGGCGACTGGGTGTCGCCGCACTTCCTCGGCCTGCGCTACTTCGAGAAGCCGGTCGCCGGCTACTGGATG ATCGCCCTCGGCCAGGCGGTCTTCGGCGAAAACCTGTTCGGCGTGCGCATCGCCTCGGTCGTCGCCACCGCCCTCAGCGTCCTGCTCGCCTACCTGCTGG CCCGCCGCCTGTGGCGCGACCCGCGCACCAGCCTGGCATGCGCGCTGCTCTACGCCAGCTTCGGCTTGATCGCCGGGCAGTCCGGTTATGCCAACCTCGA CCCGCAATTCACCTTCTGGGTCAACCTGAGCCTGGTGGCGCTGTGGCATGCCCTCGACGCGCGGAGCCGCCGCGCGCGCCTGCTCGGCTGGACCCTGCTC
|
|
Amino Acid Sequence |
>4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase ArnD
MIQAGLRIDVDTFRGTRDGVPRLLELLDEAGLKATFFFSVGPDNMGRHLWRLARPAFFWKMLRSRAASLYGWDILLAGTAWPGKPIGRELGPLMRRTQAA GHEVGLHAWDHHAWQTHAGVWSVQQLGEQIRRGSDCLADILGQPVRCSAAAGWRADGRVVEAKQPFGFRYNSDCRGRGAFRPRLADGSPGIPQVPVNLPT FDEVVGPGLPREAYNDFILERFAAGRDNVYTIHAEVEGLLLAPAFRELLRRAERRGIRFRPLGELLPDDPRSLPLAELVRGRLAGREGWLGVRQP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|