Pseudomonas aeruginosa YL84, AI22_RS29495
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa YL84, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGTCATCGGCTGCATCATCGCCACCCGCCTGATCAACCGCATCGGCCGGCGCTGCATGCTGCTGCACAGCTTCCTCTGGTCCGGCCTGGCGCTGCTCGGG CTGGGCGTCTTCCACGCCGGCTCGGAGGCGACCATCCTCGGCCTGTTCGGTGCCTACGCGCTGTTCATCGGCGGCGCCCAGGTGCTGCAACTGGTCTACC CGAACGAACTGTTCCCCACCGAGATCCGCGCCTTCGCGGTCGGCGTCGGCACCTCGTTATCGCGCGTCGGCGCCGCGGTGGGCACCTACCTGGTGCCGCT TTCCCTGGAAACCCTGGGTACCGCCCAGACCATGTACGCCGCCGCGCTGGTGACCCTGCTCGGGCTGCTCGTGACCTGGGCCCTGGCGCCGGAAACCCGT TCGCTGAACCTGCAGCAGGCGGCTTCGCTCACCTGAACCACCCGCCGCGGCAGCGTCCGCCGGGTGCGCCGCGGCCCAGCATCCCACAGGAGGAAACCCC
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| DNA Sequence for Gene |
>AI22_RS29495
GTGAAATTCGAAGGTATCTATACCCCCGCCATCACCCCGCTGAGCGCCGACGGCAGCATCGACACCCAGGCCTTCGCCGAGGTCCTGGAGTTTCTCGTCG AGTCGAAGGTGCACGGCATCGTGATCGGCGGCTCCACCGGCGAGTACTACGCGCACACCGCCGAGGAACGCCTGGCCCTCGCCGCCCACGCCAGCAAAGT CATCGCCGGGCGCCTGCCGCTGGTGGTGGGAACCGGCGCGATCCGCACCGAGGACTCGCTGGCCTACGCCGAAGCCGCCCGCGCCATCGGCGCCGACGCC ATCCTGGTCGGCTCGCCGCCCTACGCGCTGCCGACCTCGCGGGAGATCGCCGAGCACGTGCTGGCGGTGGATCGCGCCGCCGGCCTGCCGATCATGCTCT ACAACTATCCGGCGCGGATGGGCGTGGAGATGGACGAGGCGTTCTTCGCCGCCGTCGCCGGCTGCCGCAACATCGTCGCGATCAAGGAAAGCTCCGGCTC CACCGCGCAATTGCACCGCCTGGCCTGCCGCCACCCGCGGATCGCCTTGTCCTGCGGCTGGGACGACCAGGCCCTGGAGTTCTTCGCCTGGGGCGCGCGC AGTTGGGTCTGCGCCGGCTCCAACTTCATCCCTGGCGAACACCTCGCCCTGTACCAGGCCTGCGTGGTCGAGAACGACTTCGCCAAGGGCCGGCGCATCA TGGCGGCGATGATGCCGCTGATGGACTTTCTCGAAAGCGGTCACTTCGTCCAGTCGATCAAGCACGGCTGCGAGCTGGCCGGCCTGCGCACCGGCGGCGT ACGTGCGCCGCTGAAGGCGCTGGACGAGGCCGGCAAGGCGGCACTGGCGGAGATCGTCGCCAGGCTCAAGGGCGAGGTCGCGCGGATCGTCGAGGGTGGC CGCCATGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTGCTGAGCCGGGAGGAATACGCGGCCATCGCCGCGACGCTGGACCTTCCCCAGCGCGCCTTCATCGACGGAGGGTTCCGCGATGCCTGCGGCGGCCGC ACCTTCGCCTCGACCAACCCGGCCACCGGCGAGCTGCTGGCGCAGGTCGCCGCCTGCGACGCGGAGGACGTCGGGCACGCCGTGGCCAGCGCGCGGCGGG CGTTCGAGGACGGCCGCTGGCGCTCGCGCACGCCCGCCGAGCGCAAGGCGGCGCTGCTGCGCCTGGCCGAGCTGCTGGAAGAGCACCTGCTGGAACTGGC GGTGATGGAGAGCCTCGACAGCGGCAAGCCGATCCGCGAATGCCAGCACACCGACCTGCCGGAAACCATCAATACCCTGCGCTGGCATGCCGAACTGATC GACAAGATCTACGACAGCACCGCCCCGGTCGGTTCGGCGGCGCTGGCCATGGTGGTGCGCGAGCCGATCGGCGTGGTCGGCCTGGTGCTGCCGTGGAACT
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| Amino Acid Sequence |
>dihydrodipicolinate synthetase
MKFEGIYTPAITPLSADGSIDTQAFAEVLEFLVESKVHGIVIGGSTGEYYAHTAEERLALAAHASKVIAGRLPLVVGTGAIRTEDSLAYAEAARAIGADA ILVGSPPYALPTSREIAEHVLAVDRAAGLPIMLYNYPARMGVEMDEAFFAAVAGCRNIVAIKESSGSTAQLHRLACRHPRIALSCGWDDQALEFFAWGAR SWVCAGSNFIPGEHLALYQACVVENDFAKGRRIMAAMMPLMDFLESGHFVQSIKHGCELAGLRTGGVRAPLKALDEAGKAALAEIVARLKGEVARIVEGG RHD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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