Pseudomonas aeruginosa YL84, AI22_RS17960
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa YL84, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGCCTGGCTCGCCGACCGCCTGCGCAGCAAGGTCCGCCTGCTGGCGGCGATTCTCGCCGGCGCCGCGCTGTTCACCCTGCTCCTCGGCCTCAACCACG ACCAGCCGCGCTGGCTGCTGGCGTTCGTCTTCGCCGCCGGCTTCTGCATCATCGGCGGGCAGTTGACCCTGAACGCCTTCGCCAGCAACTTCTACCCGGC CCAGGTACGCGCCACCGGCACCGGCTGGGCGCTGGGCGTGGGCCGCTTCGGTTCGATCCTCGGCCCACTGTTCGGCAGCCTGCTGCTGGGCATGCACATA TCCGTGGAGAACATCTTCATGCTTGCGGCGTTTCCCGCCGGGCTCGCCGCGCTACTGATCCTCCAGGTCCGCTCGCCCGCCGCCCAGGCGCAGCGGGAAA GCGCCGCCGCGCTGGCCGTCGAGGAATCCTGAGCCTTCACCGCGAGCGGCTTCCCGGCTACAGTGGCGGGCCGTTTCGCCGTCCGCCGCAGGAGCCGCCG
|
|
| DNA Sequence for Gene |
>AI22_RS17960
ATGAACGACGCCGACAGCCTCCAGGATTACCAACGCGTGCGCCAGCAGGCGATCCGTTCGCTGTTCGAGATCGTCGAAGGCTCCAGCGAAGGCACGGTGA TCGTCGACCGCGAGGCCCGCATCGTCTGGATCAACCAGCGCTACGCCCAGCGTTTCGGCCTCGCCGACCCGGCGCAGGCCATCGGCCGGCCCTGCGAAAG CGTGATCCCCGGTAGCCTGCTGCGCGAAGTGGTAGGCAGCGGCAAGCCGATCCTGCTGGACATGATGGACAGCGCGAAGGACCCGCTGGTGGTGATGCGC CTGCCGATCCACGACGACGCCGGCGAAGTGATCGGCGCCATCGGCTTCGCCCTGCTCGACGAACTGCGTTCGCTGTCGCCGCTGGTGACCCGCTACCTGA GCATGCAGCGCGAACTGGCCTCGACCCGCTCGCAATTGCAGGCGCGCCAGGCCAAGTACAGCTTCAGCCACTTCGTCGGCACCAGTCCGGCCAGCCTGGA AGTCAAGCGCCGCGCCCGTCGTGGCGCGGCCAGCGAAGCGCCGGTGCTGTTGCTCGGCGAGACCGGCACCGGCAAGGAACTGCTCGCCCACGCCATCCAC AGCGCTTCGCCGCGGGCGCACAAGGCCTTCGTCAGCGTGAACGCCGCGGCGATCCCGGAAAGCCTGCTGGAGGCCGAATTCTTCGGTACCGCCCCGGGGG CCTTCACCGGTGCCGAGCGCAAGGGCCGGCCAGGCAAGTTGCAGGTGGCCCAGGGCGGCACGTTGTTCCTCGACGAGATCGGCGACATGCCGCTGGCCTT GCAAGGCAAGCTGTTGCGCGTGCTACAGGAGAAAGAGTTCGAAGCGGTGGGTTCCAACGAAGTGATCCGCAGCGACATCCGCCTGGTCGCCGCCACTTCC ATCGACCTGCAGCAGGCGATGCGCGAAGGCCGTTTCCGCGCTGACCTCTACTACCGGCTGAACGTCCTGCCGATCGAGATCCCGCCGTTGCGCCAGCGCC TGGACGACCTCCCGGCGCTCTGCGAGTCGATCCTCGACAGCCTCGACCACGGCCGTCTCCACGAACTCGGCGGCGACGCCCTGGCGCTGCTCGCCCGGCA TGCCTGGCCGGGCAACGTCCGCGAACTGCGCAACGTGCTGGAACGCGCGCTGCTGCTGGCCGACCAACCGTTGCTGGACGCCACCGCCCTCGGCGCGGCG CTGGGCCCCCTGCAACCGCTGCCGGAGCTGCCTCGAGCGGCGGACGACAGGCCGGTCGGGGATTTCCAACAGGCCCGCGAAGCCTTCGAGCGCGACCTGA TCGGACGGGCCCTGGCGCAGAGTGCCGGCAATGTGGTGGAAGCGGCGAAACGCCTGGGCCTGGGTCGCTCGACCCTGTACAAGAAGATCGTGGCGCTGGG CATGCGTCTCGATAGCGGGACTCGTCTCGAAATAGAGACGAACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GACCTGCATAGCCACGGAACTTTCGCTCGATTACGTCTCCATTTTGAGACAACGCTATTCCCCACGCTCCCCTTCGTCTCGCCGCAGCCCACGAAAACCG CGATTCTGGGGCCTGGCACGGTTATCGCAATGTGCCTTTCCGACGGCCCTGCCCCGTTCCAGGCCGTCACGCCGGTGCCCGCACCGTTCGACAACAAGAA ACAGGCCCGGAGCGCCTTCCCCATGCGAAGCGCGCCCCGCAGCGCCGTGGAGATATGCCCGATGAGCGTGATCATCGCCCTTGCCGCCCTGGGCCTGCTG ATGCTGGCCGCCTACCGGGGCTACAGCGTCATCCTGTTCGCCCCCCTCGCCGCCCTCGGCGCCGTCCTGCTCACCGATCCCAGCGCGGTCGCGCCGACCT TCACCGGGGTGTTCATGGAGAAGATGGTCGGTTTCATCAAGCTTTACTTCCCGGTATTCCTGCTTGGCGCGGTGTTCGGCAAGCTGATCGAGCTGGCCGG
|
|
| Amino Acid Sequence |
>transcriptional regulator
MNDADSLQDYQRVRQQAIRSLFEIVEGSSEGTVIVDREARIVWINQRYAQRFGLADPAQAIGRPCESVIPGSLLREVVGSGKPILLDMMDSAKDPLVVMR LPIHDDAGEVIGAIGFALLDELRSLSPLVTRYLSMQRELASTRSQLQARQAKYSFSHFVGTSPASLEVKRRARRGAASEAPVLLLGETGTGKELLAHAIH SASPRAHKAFVSVNAAAIPESLLEAEFFGTAPGAFTGAERKGRPGKLQVAQGGTLFLDEIGDMPLALQGKLLRVLQEKEFEAVGSNEVIRSDIRLVAATS IDLQQAMREGRFRADLYYRLNVLPIEIPPLRQRLDDLPALCESILDSLDHGRLHELGGDALALLARHAWPGNVRELRNVLERALLLADQPLLDATALGAA LGPLQPLPELPRAADDRPVGDFQQAREAFERDLIGRALAQSAGNVVEAAKRLGLGRSTLYKKIVALGMRLDSGTRLEIETN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|