Pseudomonas aeruginosa YL84, AI22_RS16165

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa YL84, complete genome. [Details]
DNA Sequence Upstream of Gene
ACCTGCACCAACCAGAACCTGCCCCAACGGCTGCGCCTGGGCGATATCTGCGTCGCCTGCGAAGGCACGCCGGAGTTCCTCGGTTTCCGCAATATCACCC CGGCGACGCCGAGCTACGCGCCGCCGCTGAACCGCGATTTCCTCTGGAAACTGATCAGCAACATGTCGCTCAACTACCTGTCGCTGGCCAACGTCGACGC GCTCAAGGTGATCCTCGAAACCTACGACCTGCCGCGCTACTACGACCAGCATGCGGCGAAGGTCAGCAAGCGCCTGCTGGGCGGGCTCAAGTCGGTCCGC CACGAGCATGTCGACCGCCTGCATCGGGGCCTGCCGCTGCGCGGCTTGCGTACCGAGCTGACGATCGATCCGGAAGGCTACATCGGCGAGGGCGACCTGT TCGTGTTCGCTTCGGTTCTGAACGAATTTTTCGCGCTTTACGCCAGCATCAACTCCTACCACGAGTTGCGGGTGAGGAGCACACAGGGAGACGTGTACCA
DNA Sequence for Gene
>AI22_RS16165
ATGGAAACCGCGCATGGGTTTGCAGCCCCTGCTGTAAGCGCGCTGGCCCGGGGCATTCGCGAGTACTCGCTGTTCCAGGCGGTCCTGCTGGTCATGGATC GCCTCCGCGAGAAATATCCCGGCCTGGGAGACGAGGCGCTCTACGATCAGTTGGAATTCCAGGCCAATCCTAGCCTCGGTTTCCCGGGCAGCGATGTCGA TCGGGTGGAGTTCTTCGAAGAGCGCGGCATGCTGCGGGCGCGGCTGCGTTTCAACCTGATCGGCTTGTTCGGTGCCAGTTCGCCGTTGCCGGCGTTCTAC AGCGAGCAGGCTCTGGGCGACAGCGAGGAGGGCAATCCTACGCGGAACTTCCTCGATCTCTTCCATCACCGCCTGCATCGGCTGCTGTTGCCGATCTGGC GCAAGTACCGCTACCGGGTGAGCTTCCAGAGCGGCGCGAGCGATGCGTTCTCCGCTCAGTTGTTCGCCCTCGTCGGATTGGGCGGGGAAGAGATCCGCAA GGCCAGGGAACTGAACTGGAAACGCCTGCTGCCCTACCTGGGCCTGCTCAGCCTGCGGGCGCACTCGGCGGCCTTGATCGAGTCGGTGCTGCGCTACTAC TTCAAGCATGCCGAACTGGTCGCCGAGCAGTGTATCGAACGGCGCGTCGCGATCCTCGAAGAGCAGCGCAACCGGCTCGGCCTGTTCAACAGCCAGCTTG GCGAAGACGCGGTGCTGGGCGAACGGGTCCGCGACCGCAGCGGCAAGTTCCGCATTCATATCCGCCAGCTCGACTGGCAGCGCTTCCACGAGTTCCTGCC GATCGGTCCCGGCTACCAGCCGCTTTGCGCGCTGGTTCGCTTCACCCTGCGCGACCCGCTCGACTACGACATCCGGCTGGTCTTGCGCCACGAGGAAATC CGCGAGTTCCGCATCGGCGCGCAGAACGCCTGCCGCCTTGGCTGGACCAGCTGGCTGGGCCGGGAGCGCGCGGATGGCGTGGTGACGCTGGGCAGCAAGA TTCATTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGATGGATGAGCATGATCAACGTAGACCTGCAACAACTGATTCAGGCGCTGGATGCCGACACCCGGCGCGACCTCGAAGGCTCGGCCGAGCGCTGCGTAG CCCGTGGCGGCAGCAAGGTACTGGTGGAGGACCTGTTGCTGGGCCTGCTGGAGCGTCCCCAGGGACTGCTGGCGCGCGCCCTGCAGGATGCCGCGGTGGA CGCCGGCGAACTCAACGCCGCGTTGCAAGCGCGGGGCGAGCACAGCGCCTCGCGCAATCCGGTGTTCGCGCCCGAGCTGGTGCAGTGGCTGCAGGATGCG CTGTTGCTGGCCAACCTCGAACTGGGCCGTAGCCAGATCGACCAGGCGGCATTGATCCTGGCCCTGCTACGCAACCCGTTGCGCTATGCCGGCAGCCGCT ACCAGCCGCTGCTGGCGCGGCTCGACATCGAGCGGTTGAAGGATTTCGCGCTCTCGCAGCCGCTGGAGGGCGCGCCCAGCGGCAAGCCGGGCGGCGGCGA
Amino Acid Sequence
>type VI secretion protein
METAHGFAAPAVSALARGIREYSLFQAVLLVMDRLREKYPGLGDEALYDQLEFQANPSLGFPGSDVDRVEFFEERGMLRARLRFNLIGLFGASSPLPAFY SEQALGDSEEGNPTRNFLDLFHHRLHRLLLPIWRKYRYRVSFQSGASDAFSAQLFALVGLGGEEIRKARELNWKRLLPYLGLLSLRAHSAALIESVLRYY FKHAELVAEQCIERRVAILEEQRNRLGLFNSQLGEDAVLGERVRDRSGKFRIHIRQLDWQRFHEFLPIGPGYQPLCALVRFTLRDPLDYDIRLVLRHEEI REFRIGAQNACRLGWTSWLGRERADGVVTLGSKIH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site