Strain | Pseudomonas aeruginosa YL84, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CCAACCGGCTGCGATACCACTGGTTGCTGCCCTCCAGGTGCTCGGGCGTCTGGATCAGCGCCGCCATCAGCGCCGCCGCTTTGCTGCTGGACAGCTCGTC CGAACGCTGGGTCGCCTCGGCATGTGCGCGAACCCGCGTCAGTGGCGTCGGCTGCTTCCCTGCCACCGCTTCGAACAGGCTGTCGTAGGCCTTGCCCCAG CGCTCGAAGATCGCGTCGATCAGCGCATCCTTGGTACCGAAGCAGTACTGCACGCCGCCCTTGGTAATGCCCATTTCCTTCGCCACCGCATCGATGGTCA GGCCGGCCGCGCCTTCGCGACCGATCACCGCCTCGGCGGCATCGAGCAACTGGTCACGGTCGATCGTTCGTCGGCGTCCCATGGCTACCTCTTGAGTTTA AATCCATACGTATGTATTTATATTTTCACGCGCCCGCCCGTGGCGCGCAATTCCCGTTATCCACGGCGAGCGATGAACCGTTCGCCACAGAGGTTATCCC
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DNA Sequence for Gene |
>AI22_RS14360
ATGTTCCGGCAGAACCGCTGGCTGGTCCTGGCCATCGTCTCCAGCGCCCTGTTCCTCATCATCATCGACATGACCGTGCTCTACACGGCCCTGCCGCGCC TGACCCACGACCTCGGCGCGACGGCCGCGGAGAAACTCTGGATCGTCAACGCCTATCCGCTGGTGGTCGCCGGCCTGCTGCCCGGCGCCGGCTTGCTCAG CGACCGCCTTGGCCACAAGCGGCTGTTCCTCGCCGGCCTGCCGCTGTTCGGCCTGGCCTCGCTGTGCGCCGCCTTCGCCCCCAGCGCCGCGGCGCTGATC GCCGCCCGCGCCGGGTTGGCGGTGGGCGCGGCACTGATGATGCCGGCGACCCTGTCGATCGTCCGCCATGTCTTCCAGGACGAACGCGAACGCGCCCTGG CCATCGGCATCTGGGCCTCCGTCGCCTCTGCCGGCGCGGCGCTGGGGCCGGTGGTCGGCGGCGTGCTGCTGGAGTTCTTCTGGTGGGGCTCGGTGTTCCT CATCAACGTCCCGGTGGTGGTCGTCGCTTTGTTGCTGGCGCTGCCGGCCATCCCGGCCTGCGGCGGCCAGTCGCGGCGCCCATGGGACGCCCTCGGCTCG CTGCAGGTGATGTTCGGCCTGGTCGGGGTGGTGTATGCGATCAAGGAACTCAGCACACGCGCCCCGGACTTCGGGCTGGCCGTCCTCGCCGCGCTCGGCG GCATGCTCTGCCTGTACCTGTTCGTCCGCCGCCAGCGCCGCGCCCGCGAACCGATGATCGACTTCGCGCTGTTCCGCAACCGGCGCTTCGCCCGCGGCGT CGCGGTGGCCCTGGTGGCGACCATGGCGCTGGTCGGCATGGAACTGGTGTTCAGCCAGCACCTGCAACTGGTGCAGGGCCTGACGCCGCTGAAGGCCGGC CTGCTCGTCCTGCCGATCCCGCTGGCCTCGCTGGTGGTCGGGCCGCTGGCCGGCTGGCTGGTGCCGCGCTGGAGCGAGAACCGGGTGATGTGCGCCTCCC TGCTGCTCGGCAGCGCCGGATTGCTCGGCCTGGCCCTGTCCTACCAGTCCGCCACCGGAGCGCAACTGGCCAGCCTGGTGCTGCTCGGCGTCGGCTTCGG CGGCGCGATGACCGCCGCCTCCACCGCGGTGATGCTCAACGTGGACGAACAGAGTTCCGGAATGGCGGCCGCCATCGAAGACGTATCCTACGAACTGGGC GGGGTGATCGGCGTGACCCTGCTCGGCAGCCTGATGAGTTTCGTCTACGGGATGTCGCTGAGGCTGCCCTCGGCCGAGCTGCCGGCGCGGGTCCGCGACA GCCTCGACGACGCCCTGTTGGTCGCCGAGGGCCTGACGCCGGAGGTCGCGTCGCGGCTCGTCGAGCTTGCCCGGCAGGCTTTCGACCAGGCCTTCGTCGC CGTGCTACTGGCCGCCGCCGCGCTGCTCTTCCTCAGCGCCATGGCGGTCCTGCGCCAGCCGCGTCCGGCTACAGAGCCAGCGCCACCAGCACCGCACACT CGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTTCGACCAGCGCGCCGGCGGTGTCCCCGGTGGTGCCGCCGAGGCGCGCGAGGAAACGGCTGCGCAGCCAGGCGAAGAGCATCAGCGTCACCAGCAACGC CAGCAGGCCGGCCAGGCCGAACGCCAGGGCCAGGCCGAAACTCACCCCCAGCACCCACGGCAGGCTGCGCGCCGGCAGGTGCTCGGCGATGGCCTGGCCG AGGCCGCCGGGGCGCGCGTAGGGCGTGGTCAGGAACAGCAGCGGCAGGCTGCTGCGCGCCAGCCACGGGGCCAGCGGCAACAACCCGGCCTCGCCCTGGC CGAGCAGCGCCGCCAGGGCGGAGAACTTCAACAACAGGACCAGTACCAGGACCACCACCGCCACCGGGCCGCTGCGCGGGTCCTTCATGATCGCCAGGGT CCGCTCGCGGTCGCCCAGCCCGCCGACCCAGGCGTCCGCCATGTCGGCCAGGCCGTCCAGGTGCAGCGCGCCGCTCAGCGCCACCCACAGGCTCAGCAGC
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Amino Acid Sequence |
>MFS transporter
MFRQNRWLVLAIVSSALFLIIIDMTVLYTALPRLTHDLGATAAEKLWIVNAYPLVVAGLLPGAGLLSDRLGHKRLFLAGLPLFGLASLCAAFAPSAAALI AARAGLAVGAALMMPATLSIVRHVFQDERERALAIGIWASVASAGAALGPVVGGVLLEFFWWGSVFLINVPVVVVALLLALPAIPACGGQSRRPWDALGS LQVMFGLVGVVYAIKELSTRAPDFGLAVLAALGGMLCLYLFVRRQRRAREPMIDFALFRNRRFARGVAVALVATMALVGMELVFSQHLQLVQGLTPLKAG LLVLPIPLASLVVGPLAGWLVPRWSENRVMCASLLLGSAGLLGLALSYQSATGAQLASLVLLGVGFGGAMTAASTAVMLNVDEQSSGMAAAIEDVSYELG GVIGVTLLGSLMSFVYGMSLRLPSAELPARVRDSLDDALLVAEGLTPEVASRLVELARQAFDQAFVAVLLAAAALLFLSAMAVLRQPRPATEPAPPAPHT R
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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