Pseudomonas aeruginosa YL84, AI22_RS09625
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa YL84, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CATGTTCATCTTGACCGCATTGATCAGGTTGCCGGGGAAGGAGCTGGACAGGCGTTCGTAGGCCAGCGGCTGGCCCTCGATGGTGTAGCGTACCCGCTCG CCTTCGTGGGAGTCGGGCTGGGGTTGTGCCGGTTGGTCGAACAGGGCATTGAGCGGGATATTCAGCGACTTGGCGATGTTGGCCAGGGAAGAGATCGATA CACCGGTGAGGTTGCGCTCCGCCTGGGAGAGGAAGCTCGCGGTGAGACCGGATTCGCTGGCGACTTGGTGCAGGGTCTTCTTGGCGGCGCGGCGATAGCG ACGCAGGCGTTCGCCGATGCGGTCTACGGTCATTGGGGAGACTCTTGTTGAAAGGCGCAGTATACCCAGCGCGGGGCGTCAATAAAGTCTGACAGATGAA CTACCCGAACCCCTATTTTTAAGTGTGACTGAAAATTTGTTTTGACCTGAATTTAAGCTCGACTTAAATTTCAGCCCGGTCCAGACGAGGAGAACAACAA
|
|
| DNA Sequence for Gene |
>AI22_RS09625
ATGACCGTGGGTGTTGGCGGGAGTACCCCTGCGCAGGCGCTGGAGCGTCTGCGGAACATGATGGACGGCGCGCAGCCGATCGGCCTGGCGTCTTACCGTG CGCGAATCGCCGCGGCCCAGGCGTGGATGGGCGAGCATGGCATCGCCGCGGCGTACCTGCATGCAGGCAGCAACCTGCGTTACTTCAGCGGCGTGCAATG GCACCCCAGTGAACGCCTGGTGGGTGCTCTACTGCCCGCCGAGGGCGCCCTCGAATACCTTGCGCCGGCCTTCGAGGAAGGTACGGTGCGCGACTTCCAG GTGGTCGATGGCGCCATCCACACCTGGGAAGAACACCAGGATCCCTATCGCCTGCTGCTCGATCGCCTGGAGGCGCTCGGCGTGGGCGAGCGCAGCACGG TCGCACTGTGTCCGAGCCTGCCGTTCGGCATGTTCGAGCGCTTGCGCCAACAGGCGCCGGGCAGGAACTTCGTCAGCGCCGCGCCGCTGATCGACCAGGG ACGGATGCGCAAGTCGGCCGAGGAGCTGGCGCTGATGCAGCGGGCCAAGGACATGACCCTGGAAGTGCAGAAGGCCGCGGCGAGCATTCTCCGCGAAGGC ATCAGCACCACCGAAGTCGCCGAGTTCATCCACCAGGCGCACCGCAAGGTGGGCGCGCCCGGTTCGACCTTCTGCATCGTCCTGTTCGGTGCCGCCAGTG CCTTCCCGCATGGGGTGAAGCATGCGCAGGTGCTGAAGGATGGCGACATGGTGCTGATCGATACCGGCTGCCAGGTCCACGGCTACCAGTCGGATATCAC CCGCAGCTATGTGTTCGGCACGCCTAGCGCACGCCAGCGCGAATTCTGGGGGATGGAGCGCGACGCCCAACTGGCGGCCTTCGAGGCCGCGCGTCTGGGC CAGCCCTGCGAGGCGGTGGACGCCGCCGCGCGGCGTTCGCTGGAGGCCAACGGCCTGGGGCCGGACTACCGCCTGCCTGGCCTGCCGCACCGCACCGGGC ATGGCATCGGCATGGACGTCCACGAAGGCCCGTACCTGGTGCGTGGCGATCGCACGCCGCTGGATGTCGGCATGTGCTTCAGCAACGAACCGATGATCTG CGTGCCCGGCGAGTTCGGCATTCGCCTGGAGGATCACTTCTACATGACGAAGGAAGGACCGCGCTGGTTCACCCAACCGAGCCCGTCCATCGACGATCCC TTCGGCCTCGGCGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCCGGCCGAACGATAACGCCGCACGCGGGAAGGCAAGGACCAGGGCTTCCCGCGTGCGGCGCAGCGATCAGTCCAGCTTCACCCGCGAAAAGTCCCGCGC CGACATCGGGCTCATGCGGTAGCCGCTGACGTTCTTGCGTTGCGCGTCGAACATCAAAGGATGCGCCAGCGGCAACCAGGGCATCTGCTCGTGGAAGATC CGCTGCGCTTCCTTGTACAGCGCTACCCGTTGGCTCTCGTCGTTGCTCATGCGCGCCTTGCGGATGGCTTCGTCGAAGCCCTTGTCGCACCAGCGCGCGC GATTTTCCCCGGACTCCACCGAGGCGCAGCCGAGGTTGTGGGTGAGGAAGTTGTCCGGGTCGCCGTTATCGCCGATCCAGCTGTAGAGCATCATGTCGTG TTCGCCGGCCTTGGTGCGCTTGACCATCTCGCCCCACTCGAACTGGCGGATGTTCACCCGGATGCCGATGGCGGCCAGGTCGGACTGGATCAGTTGCGCC
|
|
| Amino Acid Sequence |
>metallopeptidase
MTVGVGGSTPAQALERLRNMMDGAQPIGLASYRARIAAAQAWMGEHGIAAAYLHAGSNLRYFSGVQWHPSERLVGALLPAEGALEYLAPAFEEGTVRDFQ VVDGAIHTWEEHQDPYRLLLDRLEALGVGERSTVALCPSLPFGMFERLRQQAPGRNFVSAAPLIDQGRMRKSAEELALMQRAKDMTLEVQKAAASILREG ISTTEVAEFIHQAHRKVGAPGSTFCIVLFGAASAFPHGVKHAQVLKDGDMVLIDTGCQVHGYQSDITRSYVFGTPSARQREFWGMERDAQLAAFEAARLG QPCEAVDAAARRSLEANGLGPDYRLPGLPHRTGHGIGMDVHEGPYLVRGDRTPLDVGMCFSNEPMICVPGEFGIRLEDHFYMTKEGPRWFTQPSPSIDDP FGLGG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|