Strain | Pseudomonas aeruginosa BWHPSA037 adkgb-supercont1.6, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCGGGGTGACCTACCTGGCGCTGCTGATCCCGCTGGTCAACCTGGTCATGATGCCCGCCGCCGTCGCCGGCGCCACCCTGTTCTGGGTCCGCGAGGAAG GCGAGAAGGCGCTGGTGAAATAAGCATGCGCCCGGTGTCCGCTGTCGGCATTGTCAGGCGGGCGTCAGCACCCTGACAGCCGGCGTCGGGCACACTACGA ATGCCCTCGGGAGCGTCGGCGCAGGCCGCAGCCGAGACCTGCGCCAGCCCTTGCAGACCGACTCGACGCTGCCGAACCGACTGGCCGCCGGTGCCTCCCC ACGCAGGCGGCCTTTTTTTACCCGCCTGCCTTGCCGTCCATGCAGGATGGCCGGCGCTCACCCCCTTCCTGTCCGCTACGCCCCCCTCGACTCCACCACC CTGGCACTACAGTGGCAACCAGGCGAAGCAGGCTCCGGCCCGCTTTCGATGACCACCGTCCCCAGCCCGCCCAGCGGCGGAAAACAAGAAGAGGGTCGCC
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DNA Sequence for Gene |
>Q042_RS28230
ATGTCACGTTCCGCATTCACCGCGCTCTTGCTGTCCTGCGTCCTGCTGGCGCTCTCCATGCCTGCCAGGGCCGACGACCTGCCCTACCGCTTCGGCCTGG GCAAGGCGGACATCACCGGCGAAGCCGCCGAAGTCGGCATGATGGGTTACTCCTCCCTCGAACAGAAGACCGCCGGCATCCACATGCGCCAGTGGGCGCG TGCCTTCGTGATCGAGGAACCGGCCAGCGGACGTCGCCTGGTCTACGTCAACACCGACCTGGGGATGATCTTCCAGGCCGTGCACCTGAAGGTTCTGGCC CGGCTCAAGGCGAAGTACCCCGGTGTCTACGACGAAAACAACGTGATGCTCGCCGCCACCCACACCCACTCCGGTCCGGGCGGCTTCTCCCACTACGCGA TGTACAACCTGTCGGTGCTCGGCTTCCAGGAAAAGACCTTCAACGCCATCGTCGACGGCATCGTCCGCTCCATCGAGCGGGCCCAGGCCAGGTTGCAGCC CGGCCGCCTGTTCTACGGCAGCGGCGAGCTGCGCAACGCCAGCCGCAACCGCTCGCTGCTGTCGCACCTGAAGAATCCGGACATCGCCGGCTACGAGGAT GGCGTCGACTCGCAGATGAGCGTGCTCAGCTTCGTCGACGCCAACGGCGAGCTGGCCGGCGCGATCAGTTGGTTCCCGGTGCACAGCACCTCGATGACCA ACGCCAATCACCTGATCTCCCCGGACAACAAGGGCTACGCCTCCTATCACTGGGAGCACGACGTCAGCCGCAAGAGCGGTTTCGTCGCCGCCTTCGCCCA GACCAATGCCGGCAACCTGTCGCCCAACCTGAACCTGAAGCCCGGCTCCGGTCCCTTCGACAACGAGTTCGACAACACCCGCGAGATCGGTCTGCGCCAA TTCGCCAAGGCCTACGAGATCGCCGGCCAGGCCCAGGAGGAAGTGCTCGGCGAACTGGATTCGCGCTTCCGTTTCGTCGACTTCACCCGCCTGCCGATCC GCCCGGAGTTCACCGACGGCCAGCCGCGCCAGTTGTGCACCGCGGCCATCGGCACCAGTCTGGCCGCCGGTAGCACCGAAGACGGTCCAGGCCCGCTGGG GCTGGATGAAGGCAACAATCCGTTCCTCTCGGCCCTGGGCGGGTTGCTCACCGGCGTGCCGCCGCAGGAACTGGTGCAATGCCAGGCGGAAAAGACCATC CTCGCCGACACCGGCAACAAGAAACCCTACCCCTGGACGCCGACGGTGCTGCCGATCCAGATGTTCCGCATCGGCCAGTTGGAACTGCTCGGCGCCCCCG CCGAGTTCACCGTGATGGCCGGGGTGCGGATCCGCCGCGCGGTGCAGGCGGCCAGCGAAGCGGCCGGTATCCGCCATGTGGTCTTCAATGGCTACGCGAA TGCCTATGCCAGCTACGTCACCACCCGCGAGGAATACGCCGCCCAGGAATACGAAGGCGGCTCGACCCTCTACGGCCCCTGGACCCAGGCCGCCTACCAG CAGTTGTTCGTCGACATGGCGGTGGCGCTGCGCGAACGCCTGCCGGTGGAAACCTCGGCGATAGCGCCGGACCTGTCCTGCTGCCAGATGAACTTCCAGA CCGGAGTAGTGGCCGACGATCCCTATATCGGCAAGTCCTTCGGCGACGTATTGCAACAACCCAGGGAAAGTTATCGCATCGGCGACAAGGTGACCGTCGC TTTCGTGACCGGACATCCGAAGAATGACTTGCGCACCGAGAAGACTTTCCTTGAAGTAGTGAATATCGGCAAGGATGGCAAACAGACGCCCGTGACCATT GCCACCGATAATGACTGGGATACCCAATACCGCTGGGAGAGAGTGGGTATATCTGCCTCGAAAGCGACTATCAGCTGGACCATTCCACCTGGGACCGAGC CCGGCCATTACTACATCAGGCACTACGGCAACGCGAAGAACTTCTGGACCCAGAAGATCAGCGAGATCGGCGGTTCGACCCGCGCCTTCGAGGTGCTCGA CCCCGCTCCCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGGGCTCCAGCCAAGGTTGCGAGATTCGCCTGCCAACTTTATGACGCATGAAATTCGTCAAATAAAATGTGATTTAAAACACATGAAAAAGTGAACTTTC ATTCAGCCGAGAAGGGCATGGAAATCCATTTCCATGCCCTTTGTTTTTATCCCGAAAAACTTATCAAGTTGTCGCTCAAGGTCATATCGAAGTCGCTTTC GGAATCAACCGATAAATTATCGCCATGAAACCATCGGCCCGCTGTATTCCCTGCCGGGAAAACAGCGGAGACGATTAATCATCTCGAAACAAGAAGTACG CAGATTGATGGAAATCAAAAAACCACCCGGAAAATTAAACGATGACCGAAAACTGGAAATTCCGCCGTCGAACCTTTCTCAAGCACAGCGCCCAGGCCGC TACCCTGGCCAGCCTTTCCGGGCTGTTCCCGGAAACCCTCCGGCGCGCCCTGGCCATAGAGCCGGACATCCGCACCGGGACCATCCAGGACGTCCAGCAC
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Amino Acid Sequence |
>flagellar biosynthesis protein FlgM
MSRSAFTALLLSCVLLALSMPARADDLPYRFGLGKADITGEAAEVGMMGYSSLEQKTAGIHMRQWARAFVIEEPASGRRLVYVNTDLGMIFQAVHLKVLA RLKAKYPGVYDENNVMLAATHTHSGPGGFSHYAMYNLSVLGFQEKTFNAIVDGIVRSIERAQARLQPGRLFYGSGELRNASRNRSLLSHLKNPDIAGYED GVDSQMSVLSFVDANGELAGAISWFPVHSTSMTNANHLISPDNKGYASYHWEHDVSRKSGFVAAFAQTNAGNLSPNLNLKPGSGPFDNEFDNTREIGLRQ FAKAYEIAGQAQEEVLGELDSRFRFVDFTRLPIRPEFTDGQPRQLCTAAIGTSLAAGSTEDGPGPLGLDEGNNPFLSALGGLLTGVPPQELVQCQAEKTI LADTGNKKPYPWTPTVLPIQMFRIGQLELLGAPAEFTVMAGVRIRRAVQAASEAAGIRHVVFNGYANAYASYVTTREEYAAQEYEGGSTLYGPWTQAAYQ QLFVDMAVALRERLPVETSAIAPDLSCCQMNFQTGVVADDPYIGKSFGDVLQQPRESYRIGDKVTVAFVTGHPKNDLRTEKTFLEVVNIGKDGKQTPVTI ATDNDWDTQYRWERVGISASKATISWTIPPGTEPGHYYIRHYGNAKNFWTQKISEIGGSTRAFEVLDPAP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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