Strain | Pseudomonas aeruginosa BWHPSA037 adkgb-supercont1.5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TATACATCGCGATGGTGCACATCATGCTGCCGTTCATGATCCTGCCGATCTACAGCGTGATGAAAGGCATTTCGCCGAGCTACATGCGCGCCGCGATTTC CCTCGGCTGCCACCCGTTCGCCAGCTTCTGGCGGGTGTATTTCCCACAGACCGTCGCGGGCGTCGGCGCCGGTTGCCTGCTGGTGTTCATCCTGTCCATC GGCTACTACATCACCCCGGCGCTGCTGGGCAGCCCGAACGACCAGATGGTCAGCTACTTCGTCGCCTTCTATACCAACAGCACCATCAACTGGGGCATGG CCACCGCCCTCGGCGGCCTGCTGCTGCTCGCTACCCTGGTGCTCTACGTCGTCTACAGCTGGCTGGTGGGCGCCAGCCGCCTGCGCCTGGGATAGAGGGC CTTCCGAGAAGGCCAACCGATTCCCCTCTGCCTTCGGAAAAAAGGTTGCCCGGAGGGCGGGGAGAGGGGGATCCGCACGAAACACATTGGAGAGCGAGTC
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DNA Sequence for Gene |
>Q042_RS27335
ATGCTGAGTCCCTACATGTCCCCGGTCGAGCGCCTGTGGTTCTACTCCCTGCGCATCCTCTGCGGCCTGGTACTGCTGTTCCTGGTACTGCCGGTGCTGG TCATCGTGCCGCTGTCGTTCAACTCCGGCACCTTCCTGGTCTACCCGCTGCAAGGGTTCTCCCTGCGCTGGTACGCCGACTTCTTCCAGTCCGCCGAGTG GATGCGCTCGTTGACCAACAGCATGATCGTCGCTCCGGCGGCGACCCTGCTGGCAATGGTCTTCGGCACTCTGGCAGCGATCGGCCTGACCCGCGGCGAG TTCCGCGGCAAGGCACTGGTGATGAGCCTGATGATTTCGCCGATGGTGGTGCCGGTGGTGATCATCGGCGTGGCCAGCTACCTGTTCTTCGCTCCGCTGG GGCTCGGCAACAGCTACCTGTCGCTGATCGTGGTGCATGCGGTGCTCGGCGTGCCGTTCGTGATCATCACCGTCTCCGCGACCCTGCAGGGGTTCAACTA CAATCTGGTGCGCGCCGCCGCCAGCCTCGGCGCGCCGCCGCTGACCACCTTCTTCCGGGTGACCCTGCCGCTGATCGCTCCGGGAGTGATTTCCGGCGCG CTGTTCGCCTTCGCCACCTCGTTCGACGAAGTGGTAGTGACCCTCTTCCTCGCCGGTCCCGAGCAGGCCACCCTGCCGCGGCAGATGTTCAGCGGCATTC GCGAGAACCTGAGCCCCACCATTGCCGCCGCGGCGACCTTGCTGATCGGTTTCTCCGTACTGCTGTTGCTGACCCTGGAATGGCTGCGCGGGCGCAGCGA GAAGATGCGTACCGCACAACCCGGCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCGCAGGGCGCGCCCGGCTTGGTCCGGGCGTCGGCTGCTGCGGCGAAAAGTCGTCATTTTCACCGCCAAAAACCGATAACGGCTACAATGCGCGCCTTC CGTGATCCCCTTTGAGGTGCGCCATGCAACCCTTCGCCATCGCTCCGTCGATCCTTTCCGCCGATTTCGCCCGCCTGGGCGAGGACGTGGACAAGGTGCT CGCCGCCGGTGCCGACATCGTTCACTTCGACGTGATGGACAACCACTACGTGCCGAACCTGACCATCGGCCCGATGGTCTGCTCGGCGCTGCGCAAGTAC GGCGTGAGCGCGCCGATCGACGTGCACCTGATGGTATCCCCGGTGGATCGCATCATCGGCGACTTCATCGAAGCTGGCGCCACCTACATCACCTTCCATC CGGAAGCTTCCCAGCACATCGACCGTTCCCTGCAACTGATCCGCGACGGCGGTTGCAAGGCGGGCCTGGTGTTCAACCCGGCCACTCCGCTGGAGGTGCT
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Amino Acid Sequence |
>polyamine ABC transporter permease
MLSPYMSPVERLWFYSLRILCGLVLLFLVLPVLVIVPLSFNSGTFLVYPLQGFSLRWYADFFQSAEWMRSLTNSMIVAPAATLLAMVFGTLAAIGLTRGE FRGKALVMSLMISPMVVPVVIIGVASYLFFAPLGLGNSYLSLIVVHAVLGVPFVIITVSATLQGFNYNLVRAAASLGAPPLTTFFRVTLPLIAPGVISGA LFAFATSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPTIAAAATLLIGFSVLLLLTLEWLRGRSEKMRTAQPGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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