Strain | Pseudomonas aeruginosa BWHPSA037 adkgb-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCGGTGAAGAAGGCCGGGATGCCGGCGCCGCCGGCGCGGATCTTCTCGGCCAGCGAGCCTTGCGGGGTCAGTTCGACTTCCAACTCGCCACTGAGCAGT TGTTGCTCGAACAGGGCGTTCTCGCCGACGTAGGAGGCGATCATCTTGCGGATCTGCCGGTCTTCCAGCAGCACGCCGAGGCCGAAACCGTCGACGCCGC AGTTGTTCGAGACCACCGTGAGGTCCCTGACCCCGCGCCGGCGGATTTCCGCGATCAGGTTCTCGGGAATCCCGCAGAGGCCGAAGCCCCCGGCGAGGAC GGTCATGCCGTCGGTCAGGCCTTCGAGGGCCTCTTCGTAACTGCCTACTCGCTTGTCGAGTCCGCTCATGCTGCTGTGCCTCTTCCGGCTCTTGTGATTG TGCGTGCGGCAGTCTGACTGCCGGGTCGCAAAGAGCTTCTCCGCTGCGGACTGATTTGTTAAGTTTGTTTTTCCAATCCATTGATGAGAAAAACAAATAA
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DNA Sequence for Gene |
>Q042_RS02120
ATGACCGTCAAGCAGTTGCGCGCCTTCCTCGCCGTGGCGCAGAGCCTCAGCTTCGCCCAGGCCGGCGAACGCCTGCACCTCTCCCAGCCGGCCCTGAGCC TGGCGATCAAGAGCCTGGAGGAAAGCCTCGGCGGTCCGCTGCTGGAACGTACCACCCGCAGCGTCAGCCTCACCCCCGAGGGCGAGACCCTGCTGCCGCT GGCGCTGCGCCTGCTGGCCGACTGGGACAATACCGAGGAATTGCTGCGCCAGCACTTCACCCTGCAACTGGGCAAGGTCTCCATCGCCGCCATGCCCTCC TTCGCCGGCAACCTGCTGCCGCTGGTCTTGAAGACCTTTCGCGAACGCCACCCGCGGGTCAACGTGGCGGTGCACGACGTGATCAACGAGCAGGTGCTGG AGATGGTCCGCAACCGACGCGTCGAGCTGGGCATCGCCTTCGAGCCGGAGTCCCTGGAAAACCTCGAGTTCACCCCGTTCTACAGCGACCGCTTCGTCGC CGTGGTGCCGACCGGCTCGCCGCTGTCCGGGCAGGAGCGGATCAGTTGGCGCGAACTGCTCGGCGAGCCCTTCATCACCCTGCAACGCCCCTCGGCGGTG CGCCTGCTCCTGGAAGAAAGCGTGGCCGCCGAGCACGGTCGCTTGCCGGTGGCGTTCGAGAGCCACCAACTGGTCACGGTCGGGCGGATGGTCGCCCAGG GACTCGGTGTCAGCGCCGTGCCGACCCTGTGCATCCAGCAGATGCAGGAACTCGGCGCGCGCTGCCTGCCGCTCTACGCGCCGCAGGTGCAGCGACGGGT CGGCCTGCTGCGGCTGAGCGAGCACAAGCTGTCCACCGCCGCCCAGGCCCTCAGCGACGTGCTGCTGCATGGCACCGACTGGCGCTCGCTGGCGCTGCCG CAGGACCAGTCCACGGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCAGGCAGCGGCAGGTCCGGTTATGCTTCCTGCATGTCCCGGAACAACAACAAGGACGGACACGCCATGCCCGCACCGCTCTGGAGCCCTTCCGCCGAA CGCATCGCCGCCAGTCGCATGGAGGCCTTCCGACGCTTCGTCAACCAGCGGCACGCCCTCGGCCTGGTCGACTACCCGGCGCTGCATGCCTGGAGCGTGC AGCGGCGCGAGGCGTTCTGGCAGGCCATCGTCGACTTCTTCGAGGTGCGCTTCCAGCAACCGCCGCGTGCGGTCCTCGAGGAAGGCGCGCAGATGCCCTC GGCGCGCTGGTTCCCCGGCGCCACGCTGAATTTCGCCGAACACCTGCTGCGCCGCCGCGATGATGCCCCGGCGCTGATCGCGGTGAGCGAAGACGGTCGC CGCGAGGTGCTCAGCCACGCCGAACTGGCCCGTCACGTGGCGGGCCTGCAGAAGCGCCTCGCCGCCCTGGGCATAGGCCCCGGCGACCGGGTCGCCGCGC
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Amino Acid Sequence |
>LysR family transcriptional regulator
MTVKQLRAFLAVAQSLSFAQAGERLHLSQPALSLAIKSLEESLGGPLLERTTRSVSLTPEGETLLPLALRLLADWDNTEELLRQHFTLQLGKVSIAAMPS FAGNLLPLVLKTFRERHPRVNVAVHDVINEQVLEMVRNRRVELGIAFEPESLENLEFTPFYSDRFVAVVPTGSPLSGQERISWRELLGEPFITLQRPSAV RLLLEESVAAEHGRLPVAFESHQLVTVGRMVAQGLGVSAVPTLCIQQMQELGARCLPLYAPQVQRRVGLLRLSEHKLSTAAQALSDVLLHGTDWRSLALP QDQSTE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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