Strain | Pseudomonas aeruginosa PS42 adkgl-supercont1.5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTACTTCGGCGTTCCCGCGCTGCTGCCGGAGGCGCTGGTGAGCTGGCTGAACACGCCGCACGAGACGCCCTTGCTCGACTGGCCGTCCTTCGAGTTCCTC GCCGGTGCCTGGGGGCTGACCCTCTATACCTCGGCTTTCGTCGCCGAGGAGTTCCGCGCCGGCATCGCCTCGGTACGCCCCGAGCAGCGCGCCGCCGGCC TCGCCCTGGGGCTGACCCAGCGCCAGGTATGGCGCGAGGTGGTGCTGCCGCAGGCCCTGCGCACGGCTCTGCCGCCGCTGCTCGGGCAGTACATGAATGC GCTGAAGAACTCCTCGCTGGCGATGGCCATCGGCCTGGCCGAGCTGTCCTACGCTTCGCGCCAGGTGGAAACCGAGACCTTCAAGACCTTCCAGGCCTTC GGTATCGCCACCCTTCTCTACATCGGCGCCATCGCCCTGATCGAAGCTTTCGGCCAGGCGTTGCAGCAGACCCGCCGCTACCGCCAGGGAGGTGCCTGAG
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DNA Sequence for Gene |
>Q094_RS28045
ATGGATTTCTCGGTCATCTCGGACAACCTGTCCTACCTGCTGCTCGGCGCCTACCCGGACGGCCCGCTCGGCGGAGCGGCGCTGACCCTGCTGCTGGCGT CGCTCTCCGGACTGGCTTCGGCGGTGCTCGGCCTGGTCCTCGGCGTGGCCCTCGCGGTGCTGCCCGGCAAGCCGCGCCTGCTGCTGGTGGCGCTGCTCGG CTTCTTCCGCGCGATCCCGGTGCTGATGCTGATCTTCTGGACCTACTTCCTGCTGCCGATCGTCTTCCATGTCGACGTACCGGCGCTGGCCACCGTGGTC TGCGCGCTGTCGCTGATCGGCGGCGCCTACCTCGCCCACTCGGTGTACGCCGGCATCCACAGCCTCCCCGCCGGGCAGTGGGCGGCCGCCCGCGCGCTCG GACTGCGGCCGTGGCAGGTATTGCGCCTGGTGATCCTGCCGCAGGCGCTGCCGGTGATGCTGCCATCCTTCCTCAACCAGTGGGTGTCGCTGATCAAGGA CACTTCCCTGGCCTACGTGATCGGCGTCGGCGAGCTGTCCTTCGTCGCCACCCAGGTGAGCAACCGGGTGATGGTCCACCCGACGGAGATCTTCCTGTTC GTCGCCCTGCTCTACTTCCTGCTCTGCACCAGCCTCGACCTGGCCGCCGCGTTCCTCGCCCGCCGCCGGCGGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGGCGGCCGGTGGCTCAGGCGTCGCCGCGCGCCCGCGCGTAGTCGACCAGGTCGCCGAGGTAATGCGGCGAGGCGCGCAGGACGCCATCGTCCCAGCCG TAGAGCACGCCCAGCGCCGACACCTCCATGGCCCACCAGCCCCAGGCGTAGGGGCCGGTCAGGCGGCGGGTCTTCTTCTGCGCCTTGGGGGAAAGCTGGA AGAACTCCCGGTACTGGCTTTGCAGGTAAGGCGCCAGCGCCTGGGCGTCGCTGCCGTCCGCCTCTTCGAAGAACGCCCGCAACTGCCCGAACGGCCTTGG ATGGAAGGTTTCCTCGCTGGCGGAAGTCAGGCCGAGGGCGGCCGCGCCGAGATAGTCGAGCAGGCGGTCGGTATCGAACTGCAGGACCTCCTCGACCAGC GCCGGGATGAGCTCCTGGGCATCGAGCAGCACGCCCATGGCGAGCAGTTGCAGCGCGAACGGATACTGGCCTGTGCGCGGCGCCAGGGCCGGCGCCGTCT
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Amino Acid Sequence |
>amino acid permease
MDFSVISDNLSYLLLGAYPDGPLGGAALTLLLASLSGLASAVLGLVLGVALAVLPGKPRLLLVALLGFFRAIPVLMLIFWTYFLLPIVFHVDVPALATVV CALSLIGGAYLAHSVYAGIHSLPAGQWAAARALGLRPWQVLRLVILPQALPVMLPSFLNQWVSLIKDTSLAYVIGVGELSFVATQVSNRVMVHPTEIFLF VALLYFLLCTSLDLAAAFLARRRRA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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