Pseudomonas oryzihabitans NBRC 102199, POR01S_RS05085
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAGATGGCGCAGGCCATGCGCCTGGCGCAGCAGCATGCCAGCGAGACCAGCCACGGCCATGGGCACAGCGGCATGGGCACGACGCTGTCGGCCAATGCCC TGGCCATGCGCTGCCTGCGCGTCAGCTTGGAAGAGGTCATGACCCCGGCCGCCTATGCACGGATGCTGCCGCTGGCGGCGCGACTGGCCGCCGGCCTGCG CGAGGTGATCGCCCGCCATGGCCTGGCCTGGTCGGTGACGGAGCTGGGCGCCCGCTGCGAATTCCAATTCTGCGCCACGCCGCCCACCACCGGCGCCGAG GCGGAAGCCGCCTTCCACGACAGCCTGCAGCAGGCGCTGCACCTCTACCTGATCAACCGGGGCATCCTCATCACCCCCTTCCACAACATGACCCTGTGCT GCCCGGATCTCGAAGCGGCGGACGTCGACCGCCTGCTGGCCACCCTCGACCAGGCTCTTGGCGAGCTCCTGGCGTTGCCCAGCGCCCGGGAGTGTCAGCC
|
|
| DNA Sequence for Gene |
>POR01S_RS05085
ATGAACTTCGCCGACGCCCAGGAAGCCCGTGACTTCCTCGCCGCCCACCCCGAGGTGCGCAGCATCGAACTCATGCTGATCGACGCCAATGGCGTGCCGC GCGGCAAGCTGCTGCACCGTGACGAATTGCTGGCCATCTACGAGGAGGGCCGGCCGCTGCCCAGCTCCATCCTGGCGCTGACCCTGCAGGGGGAGGACGT CGAGGCCACCGGCCTGGTCTGGGAGGTCGCCGATGTCGACTGCTGGACCTATCCGCTGCCCGGCAGCCTGACCCTGCAACCCTGGCGCAGCACCCCGACC GGCCAGGTGCAGGTGAGCATGCACCCGACCCAGGGCCTGCCGGCCACCCCCGCCGATCCCCGGCATGCCCTGGTACGGGTGATCGAGCGGCTGCAGGCCG ACGGCTTCCAGCCGGTGATGGCGGTGGAGCTGGAGTTCTATCTGCTCGACCGCACCCGCGACGCCCAGGGCCGGCCGCAACCGGCGCTGCAGATGAATGG CGTACGACCCGGCTCGCCGCAGGTCTATGGGGTCTACGAACTGGAGCAGCTGCAGCCCTTTCTCGACGACCTCTACGCCGCCTGCGAGGTGCAGGGCCTG CCGGTGCGCACGGCCATCTCCGAATACGCCCCCGGCCAGCTCGAATTGACCCTGCTGCACCGCGTCGATGCCCTTCAGGCCATCGACGAGGGCATTCGCT ACAAGCGCCTGGTCAAGGGGGTCGCTAACCGTCATGGCCTGCAGGCCTGCTTCATGGCCAAGCCGTTCGGCGACCAGGCCGGCAGTGGCCTGCACCTGCA CGTCAGCCTCGCCGACGCCGCGGGCAACAACCTCTATGCCAGCGAAGACCCTCAGGGCACGCCGCTGCTGCGCCACTCCATCGGTGGCATGCAGCACCGG ATGCTGGATGCCCTGGCGATCTTCTGTCCCAACGCCAACTCCTACCGCCGCTTCCAGGCCAACAGCTATGCGCCGCTGGCCAAGAGCTGGGGGGTCAACA ACCGCAGCGTGTCCCTGCGCGTACCCGGCGGTCCGGCCAGCGGTCGCCACATCGAGCACCGCATCTGTGGCGCCGATGCCAATCCCTATCTGGCGGCCGC GGCCATCCTCGCCGCCATCCATGAAGGCATCCGTGACGAACGCGATCCGGGGCCGGCCACTGTCGGCAATGGCTACGAGCAGGCCACCGACTTCCTGCCC ACCGACTGGCTGACCGCGCTACAGGCGCTGGAGCGCTCCAGCTGGATCCGGGAGGCACTGGGGGAGCGCTTCATCGAGGTGTACCTCGCCATCAAGCGCG CGGAGTACCGGCAATTCATGGCCGAGGTGGGCGAGCAGGACTGGCGCTGGTATCTGACCCACGCGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGGCGGTCAGCCAGCCTCGCCCGGCACGGCGGTGATGCGGTTGATGGCGATGATGCCGCCGTTCCAGATCATCTCGACCGGCGCCGCCTGGATGACAGCG GTGACCAGCCGGGGAGTCAGTAGCGCCCAGCAATGACCCGCGGCACGGCGTACCGAGCGATAGCGCAGCCCCGGGCAGCCAGTGCGTTTGGCGGCGGCGC CCAGGCTGCGCGCCGCACCATAGTCGTCGGGCTCATAGATGGGATCGGCGGCGTCCAGCACCAGGGCGTCGCGCAGTCCCTGGTCGGAAAAGCTCACCGT CAGATTGCGGAAGACGAAGCGCTCGTACTTCAGCGTCGGCACCTTCGACCAATAGGCTTCCTGGTGATGGCGAACCTCGGCCAGCGCCGTATCGGCGTGA TCGGCAAGATAAAGAACGCCGAAGCTGCCATCGCTGAAGCGTGTACCTGCAGGGTTGACGTGGGTGAAGGGGGCCGTTGCATAGGAACAGCCAGGAATGC
|
|
| Amino Acid Sequence |
>glutamine synthetase
MNFADAQEARDFLAAHPEVRSIELMLIDANGVPRGKLLHRDELLAIYEEGRPLPSSILALTLQGEDVEATGLVWEVADVDCWTYPLPGSLTLQPWRSTPT GQVQVSMHPTQGLPATPADPRHALVRVIERLQADGFQPVMAVELEFYLLDRTRDAQGRPQPALQMNGVRPGSPQVYGVYELEQLQPFLDDLYAACEVQGL PVRTAISEYAPGQLELTLLHRVDALQAIDEGIRYKRLVKGVANRHGLQACFMAKPFGDQAGSGLHLHVSLADAAGNNLYASEDPQGTPLLRHSIGGMQHR MLDALAIFCPNANSYRRFQANSYAPLAKSWGVNNRSVSLRVPGGPASGRHIEHRICGADANPYLAAAAILAAIHEGIRDERDPGPATVGNGYEQATDFLP TDWLTALQALERSSWIREALGERFIEVYLAIKRAEYRQFMAEVGEQDWRWYLTHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|