Strain | Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCGACTGGTCGGCCCAGGCCGACGACGAGGTGCTGGATCTGGCCGCCGCCCTCAACGGCGGTCGCGCCCTGGCCTGCAATGACGAGCACTATGGCCGCA TGAGCAACATCCTCAATCCGGGCCGCGCCGCCAGCATGGCCGACGGCTGGGAAACCGCGCGCCGCCGCACCCCCGGCAACGACTGGATCATCGTCGCCCT GGGCCACGCCGGCATCGTCGAGGAAATCCTGGTGGACACCTTGCACTTCAAGGGCAACTACCCGGACAGCTGCCAGATCCAGGGCGCCTATGTGCGCGGC GGCACCGACGGTCAGATCGAGACCCAGAGTCTCTTCTGGAAGGAGCTGCTGCCGCCGCAAAAGCTGCAGATGCACCAGGAGCACAGCTTCCGCGAGCAGG TGCGCGACCTCGGCCCCATCACCCACGTGCGCCTGAACATCTTCCCGGACGGCGGCGTCAGCCGACTGCGACTGTTCGGCAAGGTGGCGCGGGGCCAGGC
|
|
DNA Sequence for Gene |
>POR01S_RS02420
ATGAGCCGGCCACTGCGCATCGAGCCGCTGACCGCCGAGGGCTTCGCGCCCTTCGGCGAGGTCATAGAGACGGCGGACCGGGACTGGTATCCCATCAACA ACGGCTCGACCCAGAGATACCACGCCCTGGCACGGGTCGAGACGGGGCCGGCGGACGGCGCGGCGATCATCAGCATCTTTCGCGCCCGGCGGCTGGACTA TCCGCTGACCATCGCCATGCTCGAACGCCATCCCCACGGCAGCCAGGCCTTCGTGCCGCTGCGCGGCGAGCCTTTCCTGGTGGTGGTGGCGCCGCCGGCG ACGGTCCCGGATGCCGGCGCCATCCGCGTTTTCCGCACCGATGGCCGCCAGGGCATCAACTACCATGCCGGCGTCTGGCACCACCCTGTGCTGGCCCTGC GCGACGAGGATGAATTCCTCATCGTCGATCGCGCCGGCAGTCTGCCCAACTGCGACGAGTTCTTTTTCGCGGCCGCGGAGTGCCCGACCCTGGCGCTCTA G
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GGCGCCACTGGCGCGCGCCTGAGCTGCTTGCGCAGCAGGCGCGCACTGTCGAGACAGACCCAGGCCACTGCCAGCCAGATGGGGCCATAGGTCCAGATCG CGCCCTCCGGCAGCTGCTCGCCGAGCACATAGAGGGCGACGAACACCAGCAGCGCCGGCTCCACATAGCTGAGGATGCCGAACAGACTCAGCGGCAGCAT GCGACTCGACGCCAGCATGGCGGCGAAGGCGATGGCACTGAGCAGGCCCAGGCCTGGCAGGAGCGCCCAGAGCCAGGGCGACTGCTGCAGGATGACGCCG GGCGAGAACCAGTGCAGGGCGAGCAGCGCGAAGGGCAGCAGGCAGACCATCTCCAGGACGAACCCGGACAAGGCGTCCACCGCCATCCAGCGGCGCAGGA CGAAATACGGCGGATAGCCCACCACTGGCAGCAGGCTGACCCAGGACAGCGCCCCGGTTACCCAGACCTCGTTGACCACCCCCAGCAGCGCGCAGCCGAC
|
|
Amino Acid Sequence |
>ureidoglycolate hydrolase
MSRPLRIEPLTAEGFAPFGEVIETADRDWYPINNGSTQRYHALARVETGPADGAAIISIFRARRLDYPLTIAMLERHPHGSQAFVPLRGEPFLVVVAPPA TVPDAGAIRVFRTDGRQGINYHAGVWHHPVLALRDEDEFLIVDRAGSLPNCDEFFFAAAECPTLAL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|