Pseudomonas oryzihabitans NBRC 102199, POR01S_RS02255
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GATCGCCCACGGCCTCTCCGCCGCCGGCCTGTTCATCCTCTGCGGCCAGCTCTATGAGCGCATGCACACCCGTGACATGCGCCAGATGGGCGGGCTCTGG GCGCGGGTGCCCTACCTGCCGGCCCTGAGTCTGTTCTTCGCCTCGGCTTCGCTGGGTCTGCCGGGTACCGGCAACTTCGTCGGCGAATTCCTGATCCTGC TGGGCGCCTTCCCGGTGGTGCCGATGATCACCGTCATCGCCACCTTCGGCCTGGTGTTCGCCTCGGTCTACTCGCTGATCATGATCCACCGCGCCTACTT CGGTCCGGCCAGGGCCGAAGGTGCCCTGCCGGGTCTGAACGCACGGGAACTGTCGATGCTGCTGTTGCTTGGCGTGCTGCTGGTGCTGCTCGGCGTCTAT CCGCAGCCGGTGCTGGATACCTCGGCCGCGAGCATGGCCGGTGTCCAGCAGTGGCTCGGCGAAGCCTTCTCCTCTCTCGTTTCCGCCCGGTAAGAGCGCC
|
|
| DNA Sequence for Gene |
>POR01S_RS02255
ATGACCTTTACCTACGAACACTTCATCGCCCTCCTGCCGATCATCATCACCGGCTTCACCGCCGTGGTGGTGATGCTGGGCATCGCCTGGCGGCGGGATC ACACCATCATCCCGACCCTGGGCGTGATCGGTCTCAACCTGGCCCTGCTGTCCTGCATCCCGGCCCTGGGCGTCGGCGCCATCGACGTCACCCCGCTGCT GCGCATCGACGGCTTCACCTGCTTCTACATGGCGCTGATCCTGATCGCCACCCTGGCCTGCATGACCCTGTCGCATGCCTACATGGAAGGCTATCCGGGC AACCGCGAAGAGCTGTACCTGCTGCTGCTGATCTCCGCCACCGGCGGCCTGGTGCTGGTGGCGGCGCAGAACGTCGCCGGTCTGTTCATCGGCCTGGAAC TGCTGTCGGTACCGGTCTACGGCCTGGTGGCCTACAGCTACTTCAATCGCCGCTCCCTGGAAGCCGGCATGAAGTACCTGGTGCTGTCCGCCGCCGGTTC GGCCATCCTGCTGTTCGGCATGGCCCTGCTCTACGCCCAGTCCGGCAGCCTCAACTTCGCCGACATCGGCATGCAGATGGACGCCCCGGCCAGCACCGGC CTGCTGATGGAAATCGGCCTGGGCATGCTGATCGTCGGTCTCGGCTTCAAGCTGTCCCTGGTGCCCTTCCACCTCTGGACCCCGGACGTCTACGAGGGCG CCCCGGCGCCGGTCGGCGCCTTCCTGGCCACCGCCAGCAAGGTCGCCGTCTTCGCCGTGCTGGTACGGGTGTTCCAGACCATGCCCATGGCCACCGAAGA CGGCTGGCTGCACGATGCCATCGCCTTCATCGCCATCGCCTCCATGCTGGTCGGCAACCTGCTGGCGCTGATGCAGAGCAACCTCAAGCGTCTGCTGGGT TACTCCTCCATCTCCCACTTCGGCTACCTGCTGGTGGCAGTGGCCTCGGGCGAAGGCCTGTCGATGGAAGCCGTAGCGGTCTACCTGGTGACCTATGTTT TCACCAGCCTGGGCGCCTTCGGCGTGATCACCCTGATGTCCAGCCCGAGCAACGGCCAGCGTGACGCCGATGCCCTGTTCGAGTACCGCGGCCTGTTCTG GCGCCGCCCGTACCTGACCGCGGCGCTGACGGTGATGATGCTGTCCCTGGCCGGCATCCCGCTCACCGCCGGTTTCATCGGCAAGTTCTACGTCATCACC GTGGGCGTGGAAGCGGGCATGTGGTGGCAGACCGCGGCCATCGTGCTGGGCAGCGCCATTGGCCTGTTCTACTACCTGCGCGTGATGGTCACCCTGTACC TGACCGAGCAGGGCCTGCAGCGCCACGATGCGCCGATGAACTGGGGTCAGCGCGCCGGTGGCGTGATGCTGATCGCCATTTCCATCGCGACCTTCGTCCT CGGCGTCTATCCGCAGCCGCTGCTGCAACTGGCGCAGCTGACGGTGTTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCCAGGACGTCGCCCACGATCCCCGCTTCGGCGGGGATCGTCGTTTCTGGGGTCCGCAAGAGACCCGCCCTTGGCAGGGTCGCGCCCCGACCGCTACCCT CGGCGCCCTACCCTGCTTTTCCTGTCCTATCCTGGAGACCCTTTTCTCCCATGCCTGCGTTGAAACCTCTCACCCTCGCCATCGGCCTGCTGCTCGGCGG CCAGGCCTTCGCCGCCCCTGTCTTCGACGTCACCGAACTGAGTGACCCCGCCACCGCCTGCAGCGACCTCGACACCTTCGTCAACCAGAAGTGGGTCGCC GCCAATCCGATCCCGCCGGACAAGTCGCGCTGGGGTTCCTTCATGGCCCTGGGGGAGAAATCGCTCAACGACCAGCATGCCATCCTGCAGCGGGCGGCCC GCACGGCCGATCGGGCGGCAGCGGGCTCGGTGGAACAGAAGATCGGCTGGCTGTATCGCTCGGGCATGGACGAGGCCGCCATCGAGCGCGCCGGCTATCG
|
|
| Amino Acid Sequence |
>NADH:ubiquinone oxidoreductase subunit N
MTFTYEHFIALLPIIITGFTAVVVMLGIAWRRDHTIIPTLGVIGLNLALLSCIPALGVGAIDVTPLLRIDGFTCFYMALILIATLACMTLSHAYMEGYPG NREELYLLLLISATGGLVLVAAQNVAGLFIGLELLSVPVYGLVAYSYFNRRSLEAGMKYLVLSAAGSAILLFGMALLYAQSGSLNFADIGMQMDAPASTG LLMEIGLGMLIVGLGFKLSLVPFHLWTPDVYEGAPAPVGAFLATASKVAVFAVLVRVFQTMPMATEDGWLHDAIAFIAIASMLVGNLLALMQSNLKRLLG YSSISHFGYLLVAVASGEGLSMEAVAVYLVTYVFTSLGAFGVITLMSSPSNGQRDADALFEYRGLFWRRPYLTAALTVMMLSLAGIPLTAGFIGKFYVIT VGVEAGMWWQTAAIVLGSAIGLFYYLRVMVTLYLTEQGLQRHDAPMNWGQRAGGVMLIAISIATFVLGVYPQPLLQLAQLTVF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|