Pseudomonas oryzihabitans NBRC 102199, POR01S_RS10330
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CACCACCTGGCCGTTGGCATCGCGATAGAAGACCAGGGGTTCGCCGCAGATCTGGCGGCCTAGGGGTTTGTCCTGCACTTCGTCGGGGGTGCAGGCGACG TACCAGGCGTTCTTCGGGTACATGAATGGGACCTCTTGTTGTTGTCTATTGGATCCAATAATCGATTGAGGTCTTTAGGGGTGTCAATGCGGCTGCCAGG TCGTCGAGCGCGATTGCTGCTCGATAATCGCCCGCTAATTGGTCAAAGATAAGGGTTCTTGTAGGACGGAATAGCCTTGATCGGCCAGCGCTTTCCGGGC AGGACAGAGGTGGCGCCTGGATTCGATTGGGCAGCGGTATCTTGTGGATTGGATCCATATTTGCCAGCGTTAGCGGGCTGAGATTCCAACAACAAGAACC CAAGGATGCTCGCCATGTCAGTACGCCTCGCTCTCTTTCCGTCCAATCCCGGGCGCGTCCCGCGCGGTCGCCGTCACCTGTTCGTTGCGCGAGGTGGGCT
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| DNA Sequence for Gene |
>POR01S_RS10330
ATGACCGATCTGCGCGAGATCGTCGACCGGGGGCCTATGCGCGGCTTCCAGTACCTGGCCGTGCTGGTGTGCATCCTGCTCAACATGATCGATGGCTTCG ATGTGCTGGTGATGGCCTTTACCGCGGCCTCGGTTTCCCGCGAGTGGGGACTCTCCGGCGCTCAGGTCGGGCTGCTGCTCAGCGCCGGCCTGGTCGGCAT GGCGGCCGGTTCGCTGCTGCTGGCGCCGCTGGCCGATCGCTGGGGGCGCCGCCGGCTGATCCTGGTCTGCCTGCTGCTCTCGGGGATCGGCATGCTGCTC TCGGCGCTGGCGGGGTCGCCGCTGCAACTGGCACTGCTGCGCGGCCTTACCGGCTTGGGCGTGGGGGGAGTGCTGGCCAGCAGCAACGTGATCGCCAGCG AATATTCGGCGCGCCGCTGGCGGGGCCTGGCGGTCAGCTTGCAGGGCATGGGCTATGCGCTGGGAGCGACCCTGGGTGGCTTGCTGGCGGTCTGGCTGCT GTCGCACTGGGGCTGGCGCGCGGTCTTCTGCGCGGGTGGCCTCATCACCCTGGGCGCCCTGCCACTGGTGCTCCTTGGTCTGCCGGAATCGCTGGATTTT CTGCTCACGCGGCGGCCGGTCAGCGCCCTGGTGCAGGTCAATCGCCTGGCCCGGCGACTTGGCCAGCCTGAGCTCGCCGCGCTGCCACCGCAGGTGCAAG GCCCCGGCGCCGCCGGCACCGTTGGCCGGCTGCTGGCTCCGGCCTTGCGGCGGACCACCCTGCTGGTGTGGACGCTGTTCTTTCTGGCCATGTTCGGCTT CTACTTCATCATGAGCTGGACGCCCAAGCTGCTGACCACCCTGGGGCTTTCCGAGCAGCAGGGGGTGGCCGGTGGCGTGCTGCTGAGCGTGGGCGGCATC TTTGGCGCCGCCCTGGTGGGTCTGCTGTTCGCTCGCCTGCCGCTGTCCCGGGCGCTGGGCGGCTTCATGCTGACCACCGCGCTGCTGCTGGTGGCCTTCG CCCATATGGGCAGTTCCTACCTGGGCGCCCTGGCCATGGGCCTGCTGATCGGGCTCTTCGCCAATGGCTGCGTCGCCGGACTCTATGCGCTGCCGGCGCT GGCCTATGCCGCCGAAGTGCGCGCCACCGGGGTGGGCTGGGGCATCGGGATTGGTCGCCTGGGCGCCATTCTCTCGCCGGTAGTAGCAGGACTGCTGCTC GATAACGGGTGGCCGCCGCTGCGGCTGTACCTGGTCTTTGCTGGCGTCTTCGTCGCGGCGGGGCTGCTGCTCCTGCTGACCCGCCCCGAAGGACGGCCGG CGTCAGCGGGTTTTAGCGTGTCCGCGGGCAAGGCGCTGGGCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGCTTTTGCCAGGGTCATCGTTTTGCCAAAAATAGTTAATTGACTTAACTAATTCCCTGGCGTAGCTTCAGTGCCATACCCACCCAACAACAAGAGGCA CACGCCATGGGCAGTTACGACGGACGCTGGCAGACGGTCAAAGTGGACATCGAGGACGGTATCGCCTGGGTGACGCTCAATCGTCCGGAAAAACGCAATG CCATGAGCCCCACCCTCAACCGCGAGATGGTCGAGGTGCTGGAAACCCTGGAGCAGGACGCCACTGCCGGCGTGCTGGTGCTGACCGGTGCCGGCGAGGC CTGGACCGCGGGCATGGACCTCAAGGAATACTTCCGCGAGACCGATGCCGGCCCGGAGATCCTGCAGGAAAAGATTCGCCGCGAAGCCTCCCAGTGGCAG TGGAAGCTGTTGCGCATGTACGCCAAGCCGACCATCGCCATGGTCAACGGCTGGTGCTTTGGCGGCGGCTTCAGTCCGCTGGTGGCCTGCGACCTGGCCA
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| Amino Acid Sequence |
>MFS transporter
MTDLREIVDRGPMRGFQYLAVLVCILLNMIDGFDVLVMAFTAASVSREWGLSGAQVGLLLSAGLVGMAAGSLLLAPLADRWGRRRLILVCLLLSGIGMLL SALAGSPLQLALLRGLTGLGVGGVLASSNVIASEYSARRWRGLAVSLQGMGYALGATLGGLLAVWLLSHWGWRAVFCAGGLITLGALPLVLLGLPESLDF LLTRRPVSALVQVNRLARRLGQPELAALPPQVQGPGAAGTVGRLLAPALRRTTLLVWTLFFLAMFGFYFIMSWTPKLLTTLGLSEQQGVAGGVLLSVGGI FGAALVGLLFARLPLSRALGGFMLTTALLLVAFAHMGSSYLGALAMGLLIGLFANGCVAGLYALPALAYAAEVRATGVGWGIGIGRLGAILSPVVAGLLL DNGWPPLRLYLVFAGVFVAAGLLLLLTRPEGRPASAGFSVSAGKALG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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