Pseudomonas oryzihabitans NBRC 102199, POR01S_RS11355
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF13487 | HD domain | - | - | 512 | 581 | 9.5E-19 |
| SUPERFAMILY | SSF109604 | HD-domain/PDEase-like | - | - | 430 | 628 | 1.57E-33 |
| Gene3D | G3DSA:1.10.3210.10 | Hypothetical protein af1432 | - | - | 427 | 643 | 1.0E-77 |
| Pfam | PF05226 | CHASE2 domain | IPR007890 | CHASE2 | 14 | 352 | 3.3E-51 |
| CDD | cd00077 | HDc | IPR003607 | HD/PDEase domain | 453 | 597 | 2.14959E-23 |
| SMART | SM00471 | hd_13 | IPR003607 | HD/PDEase domain | 449 | 599 | 2.1E-10 |
| SMART | SM01080 | CHASE2_2 | IPR007890 | CHASE2 | 23 | 361 | 2.6E-52 |
| PANTHER | PTHR45228 | CYCLIC DI-GMP PHOSPHODIESTERASE TM_0186-RELATED | - | - | 422 | 643 | 8.0E-78 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.