Pseudomonas oryzihabitans NBRC 102199, POR01S_RS15505
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTCAATCCGGCGACCCAGCACTCCTTCATCATCACCGAGGAGCTGGCGCCCACTGTCAGTCTCGAAGACTTCAGTCTCGACTGGGTCCGCCAGCCCCCCG AGCCGGCGCTCAAGCGGGCGCTGATCGCCGAGGTGGCGCGCATGACCGGCACCATGCACCGGGCCGGCGTCAATCATCGCGACTGCTACATCTGCCATTT CCTGCTCGACACCGCCCAGCCGGTCACCGTGGCCACTCTGCGACTCTGGCTGATCGACCTGCACCGCGCCCAGTGCCGCGCCCAGGTGCCCCGGCGCTGG CGCGACAAGGACCTGGCCGGACTGTATTTCTCCGCCCTGGGCATCGGCCTGACGCGGCGCGACTTCCTGCGCTTCCTGCGCGGCTACTTCCAGCGCCCGC TGCGCGAGATCCTGCGCGACGAGGCGCCTTTGCTGGCGCGGCTGGAACGCAAGGCCGCCGCCTTGCTGGAGCGCAAGGAACGCTACGGGGACCGGCTCTG
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| DNA Sequence for Gene |
>POR01S_RS15505
ATGGCTGACTGGCGTATCGATTCCAGCGTCGCCCACCTGCCCGAATTCGCGACCCTGGACGCGGTGTTCGCCCTGACCGGCGAACGCCTGACCAGCGATC CGCTGTCGGAAGTGGTGCGCATCGAGCGCGACGGCATCCGCTACTACGTCAAGCGCTACCACGGCGCCGGCAAGGGACTGCGGCGCTATGTCGGGCGGCC GCGGGTCAAGGCCGAGTGGCAGAATCTCAAGCGCTTCGCCAAGTGGGGCATCGCCACCGCGCCGGTGGTGGCCTGGGGGATGGAGCGTTCGCCCCGGGGG TTCATCCGCGGCGCCATGATCACCCGGGAGATTCCCGACACCCTGGATCTCGCCGAACTGGCCCGGCGCGAGGATCCACGCCTGCGCGACCGGGTCTGGG TCGACAACGTCAGCCGCCAGCTGGCCGCGGCCACCCGCACCCTGCACGACCACCATTTCGTCCATAACGATCTCAAGTGGCGCAACCTGCTGGTGGATGG CCAGGGCGTGCTCTATTTCATCGATTGCCCGGCCGGCGCCTTCTGGGTCGGCCACTGGCTGCGCTGGCGCATCGTCAAGGACCTGGCCTGCCTGGACAAG GTGGCCAAGTACCAGCTGTCGCGCACCCAGCGCCTCAGGTTCTATCTGCAATACCGCGGTCGCGCGCGCCTCAGCGACAACGACAAGGGGCGCATCCGCG AGGTGCTGGACTATTTCAAGGGGCGGGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGAGGTATGGGCGGCCGAGGATCGGGCCGTGCTGGCCGGCCAGGGCCTGGACAGCTTCGCGGCGCTGTGGGCGCTGGAGCTGACCGCGGTGGATGAACC CAACCAGGGGCGTGGCGGCTTCAGCCAGGTGTTTCGCCTGGACATCGCTGGTCATGGCTACTACCTCAAGCGCCAGCGCGACTACCTGACCCGGACCCTG GCCCGCCCGTTGGGCGAGCCGACCTTCGCCCGCGAGAGTCGCAACATCCGCCGCTACGCCGAGCTCGGCATCCCGGCGCTGGAGCTGGCCTATTACGGCG AGCGCCGCGACGACCAGGGCTGGCGAGCCATCCTGCTGACCCGGGCGCTGGATGACTGGCGCGATCTGGACAGCTGGCTGCGGGTCTGGCCGCACCTGGC GCCGGACGAGCGCCAGGCGGTGCTGGTCGCCGTCGGTGAACTGGCCCGGCAGCTGCACGGCGCCGGCCAGGTGCACGGCTGCTTCTATCCCAAGCATCTG
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| Amino Acid Sequence |
>heptose kinase
MADWRIDSSVAHLPEFATLDAVFALTGERLTSDPLSEVVRIERDGIRYYVKRYHGAGKGLRRYVGRPRVKAEWQNLKRFAKWGIATAPVVAWGMERSPRG FIRGAMITREIPDTLDLAELARREDPRLRDRVWVDNVSRQLAAATRTLHDHHFVHNDLKWRNLLVDGQGVLYFIDCPAGAFWVGHWLRWRIVKDLACLDK VAKYQLSRTQRLRFYLQYRGRARLSDNDKGRIREVLDYFKGRE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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